RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 OR5AS1Q8N127 324 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 STEAP2Q8NFT2 490 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 OR56B1Q8NGI3 324 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 OR2Y1Q8NGV0 311 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 SSC4DQ8WTU2 575 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 MITD1Q8WV92 249 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 PP6455Q8WZ26 134 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 TMEM54Q969K7 222 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 SCGB3A2Q96PL1 93 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 PHB2Q99623 299 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 DHRS9Q9BPW9 319 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 MFFQ9GZY8 342 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 CST11Q9H112 138 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 TMEM185BQ9H7F4 350 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 COMMD9Q9P000 198 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 MRPS28Q9Y2Q9 187 aaKnown RBP11.4□□□□□ -0.58
SHMT2-205ENST00000553474 EML6Q6ZMW3 1958 aa11.4□□□□□ -0.58
SHMT2-205ENST00000553474 KIAA1549Q9HCM3 1950 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 B8ZZF3 427 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 OR2F2O95006 317 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SIX6O95475 246 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 LIFP15018 202 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF28P17035 718 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 OTX1P32242 354 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 THBS4P35443 961 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SUCLG1P53597 346 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 CLDN17P56750 224 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 HIST1H3AP68431 136 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZFP36L1Q07352 338 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 MFAP5Q13361 173 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 OR2F1Q13607 317 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 INPP5JQ15735 1006 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 VAX1Q5SQQ9 334 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 HIST2H3PS2Q5TEC6 136 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 HIST2H3AQ71DI3 136 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 COMMD2Q86X83 199 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 DEFB124Q8NES8 71 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SUN5Q8TC36 379 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 RBPMSQ93062 196 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 NKD1Q969G9 470 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM41AQ96HV5 264 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SGCZQ96LD1 299 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SF3B5Q9BWJ5 86 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 LPAR5Q9H1C0 372 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZMAT3Q9HA38 289 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 RDH8Q9NYR8 311 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 NCOA6Q14686 2063 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 hCG_1807616A0A1W2PRN6 198 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 WIPF3A6NGB9 483 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 DHRS7CA6NNS2 312 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF814B7Z6K7 855 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 NPIPA2E9PIF3 369 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 NPIPA3F8WFD2 350 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 RER1O15258 196 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 CBR3O75828 277 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 KLF7O75840 302 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 DUS4LO95620 317 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 FCER2P06734 321 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 UMODP07911 640 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 PRF1P14222 555 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 HIST1H1DP16402 221 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ENPP1P22413 925 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 MPGP29372 298 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 HOXD11P31277 338 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 CDAP32320 146 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 PRKXP51817 358 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 RPS27AP62979 156 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 UBA52P62987 128 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 RAC1P63000 192 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 PPA1Q15181 289 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SIGIRRQ6IA17 410 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 GLIPR1L1Q6UWM5 242 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 DBX2Q6ZNG2 339 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZNF546Q86UE3 836 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 OR4S1Q8NGB4 309 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 OR14K1Q8NGZ2 314 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 LRRC20Q8TCA0 184 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 MR1Q95460 341 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 RAB3CQ96E17 227 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 C1orf147Q96MC9 270 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 NKX3-1Q99801 234 aaPredicted RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 GAL3ST1Q99999 423 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 OCSTAMPQ9BR26 566 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 PIGQQ9BRB3 760 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 SELENOIQ9C0D9 397 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 ZMAT5Q9UDW3 170 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 NOP16Q9Y3C1 178 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 PTRH2Q9Y3E5 179 aaKnown RBP11.39□□□□□ -0.59
SHMT2-205ENST00000553474 FLVCR1Q9Y5Y0 555 aa11.39□□□□□ -0.59
SHMT2-205ENST00000553474 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
SHMT2-205ENST00000553474 PCNX2A6NKB5 2137 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 OR5H14A6NHG9 310 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 CDC14BO60729 498 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 CA11O75493 328 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 HCKP08631 526 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 ICAM2P13598 275 aa11.38□□□□□ -0.59
SHMT2-205ENST00000553474 HRH1P35367 487 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms