RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 Q7L0L9 218 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 RNF144BQ7Z419 303 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 COMMD2Q86X83 199 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 OR10S1Q8NGN2 331 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 BANF2Q9H503 90 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 SEC61A2Q9H9S3 476 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 CHST11Q9NPF2 352 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 REV3LO60673 3130 aa15.55■□□□□ 0.08
SYNE3-202ENST00000553340 AMY2BP19961 511 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 LPAR6P43657 344 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 OR3A2P47893 321 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 S100A10P60903 97 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 ARFRP1Q13795 201 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 PRSS58Q8IYP2 241 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 POC1AQ8NBT0 407 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 OR56B1Q8NGI3 324 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 MOB1AQ9H8S9 216 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 UCK1Q9HA47 277 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 GSKIPQ9P0R6 139 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 SEC16AO15027 2179 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 OR3A4PP47883 348 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 TMEM50BP56557 158 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 FAM76BQ5HYJ3 339 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 RPL7L1Q6DKI1 246 aaKnown RBP15.54■□□□□ 0.08
SYNE3-202ENST00000553340 LHFPL1Q86WI0 220 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 ST8SIA1Q92185 356 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 MVB12AQ96EY5 273 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 C1orf147Q96MC9 270 aaPredicted RBP15.54■□□□□ 0.08
SYNE3-202ENST00000553340 EMC6Q9BV81 110 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 CHRNA10Q9GZZ6 450 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 MEMO1Q9Y316 297 aa15.54■□□□□ 0.08
SYNE3-202ENST00000553340 COLCA2A8K830 154 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 ZNF354AO60765 605 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-202ENST00000553340 RAD51DO75771 328 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 SERPINA5P05154 406 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 BIDP55957 195 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 RAB5BP61020 215 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 MISPQ8IVT2 679 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 OR5AS1Q8N127 324 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 ZNF441Q8N8Z8 693 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 ARHGAP5-AS1Q96IT6 56 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 SMCO4Q9NRQ5 59 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 CYP8B1Q9UNU6 501 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 COL5A1P20908 1838 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-202ENST00000553340 CD5P06127 495 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 NME2P22392 152 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 LAP3P28838 519 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 IL15RAQ13261 267 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 ABHD12BQ7Z5M8 362 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-202ENST00000553340 OR13G1Q8NGZ3 307 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 URM1Q9BTM9 101 aaKnown RBP15.53■□□□□ 0.08
SYNE3-202ENST00000553340 ATXN7L1Q9ULK2 861 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-202ENST00000553340 PCDHGA1Q9Y5H4 931 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 SLCO1B1Q9Y6L6 691 aa15.53■□□□□ 0.08
SYNE3-202ENST00000553340 MFNGO00587 321 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 CRTAPO75718 401 aaPredicted RBP15.52■□□□□ 0.08
SYNE3-202ENST00000553340 HTR3BO95264 441 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 HCKP08631 526 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 GIMD1P0DJR0 217 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 ADH6P28332 368 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.08
SYNE3-202ENST00000553340 SULT1A2P50226 295 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 C9orf50Q5SZB4 431 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 AADACL3Q5VUY0 350 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 SULT4A1Q9BR01 284 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 RNF122Q9H9V4 155 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 MMP17Q9ULZ9 603 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 OSGIN2Q9Y236 505 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 POLR1DQ9Y2S0 133 aa15.52■□□□□ 0.08
SYNE3-202ENST00000553340 ANKUB1A6NFN9 424 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 FIGNL2A6NMB9 653 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 ZNF878C9JN71 531 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 FCGR3AP08637 254 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 HOXB5P09067 269 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 FOLR2P14207 255 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 GLRA1P23415 457 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 CD80P33681 288 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 HSD11B2P80365 405 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 FAM219AQ8IW50 185 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 DDIT4LQ96D03 193 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 GPER1Q99527 375 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 CRB3Q9BUF7 120 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 ST6GALNAC5Q9BVH7 336 aa15.52■□□□□ 0.07
SYNE3-202ENST00000553340 A0A1W2PP11 408 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 C2orf72A6NCS6 295 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 ADAM10O14672 748 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 AGPAT2O15120 278 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 FBXO24O75426 580 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 EIF3GO75821 320 aaKnown RBP eCLIP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 SFTPBP07988 381 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 PTGFRP43088 359 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 P2RY4P51582 365 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 TAS2R46P59540 309 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 BTNL8Q6UX41 500 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 OR2AJ1Q8NGZ0 328 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 TMEM106CQ9BVX2 250 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 SUSD2Q9UGT4 822 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 POMT1Q9Y6A1 747 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 PHF3Q92576 2039 aaKnown RBP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms