RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ACSL3O95573 720 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FTH1P02794 183 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 STATHP02808 62 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 MT-ND2P03891 347 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SLC35E2BP0CK96 405 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SLC35E2P0CK97 266 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 NPIPA8P0DM63 369 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ADORA3P0DMS8 318 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 MYL2P10916 166 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 CCL2P13500 99 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FOLR2P14207 255 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 NQO2P16083 231 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ZNF25P17030 456 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ATP6V1B2P21281 511 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 CNR1P21554 472 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 LHCGRP22888 699 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ME2P23368 584 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 MMP11P24347 488 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 DDTP30046 118 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 GCH1P30793 250 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 NAA10P41227 235 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 CCR6P51684 374 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 XKP51811 444 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 PRKXP51817 358 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 B3GALT5-AS1P59052 145 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 RAB5BP61020 215 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 RAP1AP62834 184 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FKBP3Q00688 224 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SPIBQ01892 262 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 EPS8Q12929 822 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TMED2Q15363 201 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 MPPED2Q15777 294 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SNAPC1Q16533 368 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 RBBP7Q16576 425 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ZNF239Q16600 458 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 GUK1Q16774 197 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 HAGHQ16775 308 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 DEFB110Q30KQ9 67 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 PTPN20Q4JDL3 420 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TFDP3Q5H9I0 405 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 DHRS7BQ6IAN0 325 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FAHD2BQ6P2I3 314 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TRAT1Q6PIZ9 186 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 WDR59Q6PJI9 974 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TMEM270Q6UE05 265 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SPESP1Q6UW49 350 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 MBOAT1Q6ZNC8 495 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 EIF3MQ7L2H7 374 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ARCQ7LC44 396 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SIAH3Q8IW03 269 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 LRRC75A-AS1Q8N1F1 130 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 PQLC3Q8N755 202 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ZNF283Q8N7M2 679 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 OR11G2Q8NGC1 345 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 OR13F1Q8NGS4 319 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SGMS2Q8NHU3 365 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FAM57AQ8TBR7 257 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TRMT10AQ8TBZ6 339 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 C16orf78Q8WTQ4 265 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FAM222BQ8WU58 562 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 PSMF1Q92530 271 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SLCO2A1Q92959 643 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 C8orf44Q96CB5 159 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 CXorf40BQ96DE9 158 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 FAHD2AQ96GK7 314 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 MS4A14Q96JA4 679 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 C12orf66Q96MD2 445 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 COL21A1Q96P44 957 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 PAFAH2Q99487 392 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 C11orf70Q9BRQ4 267 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 LMF2Q9BU23 707 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 KATNB1Q9BVA0 655 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ATG10Q9H0Y0 220 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ELOVL6Q9H5J4 265 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 REEP4Q9H6H4 257 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 CCNB1IP1Q9NPC3 277 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 PNO1Q9NRX1 252 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ZCCHC3Q9NUD5 404 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 LYARQ9NX58 379 aaKnown RBP4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TAB2Q9NYJ8 693 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ARMCX1Q9P291 453 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SEC14L4Q9UDX3 406 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 UBQLN2Q9UHD9 624 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 OPN4Q9UHM6 478 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 ZNF225Q9UK10 706 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 OR52A1Q9UKL2 312 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 RNF11Q9Y3C5 154 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 EPPK1P58107 5090 aaKnown RBP4.07□□□□□ -1.76
ATXN3-218ENST00000553309 IGLV3-10A0A075B6K4 115 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 CIB4A0PJX0 185 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 MSGN1A6NI15 193 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 SERPINE3A8MV23 424 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 A8MV72 311 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-218ENST00000553309 RAD51CO43502 376 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 CHST10O43529 356 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 TLX2O43763 284 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-218ENST00000553309 CD5LO43866 347 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 CDC40O60508 579 aaKnown RBP eCLIP4.07□□□□□ -1.76
ATXN3-218ENST00000553309 VAMP5O95183 116 aa4.07□□□□□ -1.76
ATXN3-218ENST00000553309 GADD45GO95257 159 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms