RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-207ENST00000553290 RAB40AQ8WXH6 277 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 DVL3Q92997 716 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-207ENST00000553290 AMELYQ99218 206 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 SLC6A7Q99884 636 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 MMADHCQ9H3L0 296 aaPredicted RBP10.83□□□□□ -0.68
ACTN1-207ENST00000553290 RGCCQ9H4X1 137 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 TRIM36Q9NQ86 728 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 PAPOLBQ9NRJ5 636 aaKnown RBP10.83□□□□□ -0.68
ACTN1-207ENST00000553290 DNAJC27Q9NZQ0 273 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 CLN8Q9UBY8 286 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 NUP50Q9UKX7 468 aa10.83□□□□□ -0.68
ACTN1-207ENST00000553290 LGALS8O00214 317 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 PHYHO14832 338 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 TIPRLO75663 272 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 RGS9O75916 674 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-207ENST00000553290 SLC2A5P22732 501 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 NPY4RP50391 375 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
ACTN1-207ENST00000553290 ESRRGP62508 458 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 SNAPC1Q16533 368 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 TMEM236Q5W0B7 351 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 FAHD1Q6P587 224 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 PARP8Q8N3A8 854 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 CSNK2A3Q8NEV1 391 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 OR8S1Q8NH09 359 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 OR5K1Q8NHB7 308 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 FAM216AQ8WUB2 273 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 UTP4Q969X6 686 aaKnown RBP10.82□□□□□ -0.68
ACTN1-207ENST00000553290 PGAM5Q96HS1 289 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 NIPAL2Q9H841 368 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 BRD7Q9NPI1 651 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 TVP23BQ9NYZ1 205 aa10.82□□□□□ -0.68
ACTN1-207ENST00000553290 TRAV38-1A0A0B4J264 116 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 IGHV2-70DA0A0C4DH43 119 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 KIR2DS1A0A191URI9 304 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 hCG_38984A0A1B0GV85 526 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 A6NLC8 198 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 NDUFA2O43678 99 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 GRPP07492 148 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 CD80P33681 288 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 GNALP38405 381 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 PSMB10P40306 273 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 NAA10P41227 235 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-207ENST00000553290 GSK3AP49840 483 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 DAPP51397 102 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 APOFQ13790 326 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 OR8B8Q15620 311 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 GFOD2Q3B7J2 385 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 WDR25Q64LD2 544 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-207ENST00000553290 LYPD2Q6UXB3 125 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 RBMS3Q6XE24 437 aaKnown RBP10.81□□□□□ -0.68
ACTN1-207ENST00000553290 ZNF841Q6ZN19 808 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 FTMTQ8N4E7 242 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 BBS1Q8NFJ9 593 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 PRRG3Q9BZD7 231 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 YIPF3Q9GZM5 350 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 C1orf123Q9NWV4 160 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 ZNF319Q9P2F9 582 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 ERVK-18Q9QC07 812 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 ZNF391Q9UJN7 358 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 LAMP5Q9UJQ1 280 aa10.81□□□□□ -0.68
ACTN1-207ENST00000553290 hCG_1807616A0A1W2PRN6 198 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 OOEPA6NGQ2 149 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 LHBP01229 141 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 ALOX5APP20292 161 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 PSMA6P60900 246 aaKnown RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 ACTG1P63261 375 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 PTGES3Q15185 160 aaKnown RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 ATP6AP1Q15904 470 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 TUSC1Q2TAM9 212 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 KLF17Q5JT82 389 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 LCN1P1Q5VSP4 162 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 C1orf146Q5VVC0 180 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 CD276Q5ZPR3 534 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 SFRP4Q6FHJ7 346 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 KCTD18Q6PI47 426 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 DEGS2Q6QHC5 323 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 KRT77Q7Z794 578 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 BOLLQ8N9W6 283 aaKnown RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 C19orf18Q8NEA5 215 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 DACT3Q96B18 629 aaPredicted RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 TEAD3Q99594 435 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 NUDT16L1Q9BRJ7 211 aaKnown RBP10.8□□□□□ -0.68
ACTN1-207ENST00000553290 RNPEPL1Q9HAU8 725 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 ABCB9Q9NP78 766 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 KRT84Q9NSB2 600 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 ANK2Q01484 3957 aa10.8□□□□□ -0.68
ACTN1-207ENST00000553290 ACOD1A6NK06 481 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 ANXA2P2A6NMY6 339 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 C3orf80F5H4A9 247 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 G3V2T6 193 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 HAX1O00165 279 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 TNFRSF13BO14836 293 aaPredicted RBP10.79□□□□□ -0.68
ACTN1-207ENST00000553290 ENSAO43768 121 aaKnown RBP10.79□□□□□ -0.68
ACTN1-207ENST00000553290 FASP25445 335 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 IL5RAQ01344 420 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 C12orf54Q6X4T0 127 aa10.79□□□□□ -0.68
ACTN1-207ENST00000553290 ZNF826PQ6ZT77 177 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms