RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 GCM2O75603 506 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 REM1O75628 298 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 UPK1BO75841 260 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 TTC4O95801 387 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 GOLGA8HP0CJ92 632 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 PGAM1P18669 254 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 ARR3P36575 388 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 POLR2IP36954 125 aaKnown RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 PPOXP50336 477 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 GFERP55789 205 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 ESRRGP62508 458 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 C2orf54Q08AI8 447 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 OR1Q1Q15612 314 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 UBE2SQ16763 222 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 NDUFAF6Q330K2 333 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 FBXW9Q5XUX1 488 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 SH2D6Q7Z4S9 175 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 LINC01551Q86U37 167 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 CDKL3Q8IVW4 592 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 SLC30A8Q8IWU4 369 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 PGAM4Q8N0Y7 254 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 C19orf18Q8NEA5 215 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 OR5W2Q8NH69 310 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 LGALS14Q8TCE9 139 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 RDH12Q96NR8 316 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 NAPGQ99747 312 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 KCNS3Q9BQ31 491 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 SULT4A1Q9BR01 284 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 UTP23Q9BRU9 249 aaKnown RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 ULBP2Q9BZM5 246 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 OR51B5Q9H339 312 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF229Q9UJW7 825 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 TBX21Q9UL17 535 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 CFL2Q9Y281 166 aa3.25□□□□□ -1.89
SCFD1-209ENST00000553280 TSSC4Q9Y5U2 329 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF646O15015 1829 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-209ENST00000553280 TRAV19A0A0A6YYK7 116 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 A0A1W2PP18 115 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 SEC14L6B5MCN3 397 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 KRBOX1C9JBD0 128 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 TNFRSF11BO00300 401 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 B4GALT5O43286 388 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 SPAG7O75391 227 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 SLC22A5O76082 557 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 SMC2O95347 1197 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF823P16415 610 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 LOXP28300 417 aaPredicted RBP3.24□□□□□ -1.89
SCFD1-209ENST00000553280 TALDO1P37837 337 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 KCNJ3P48549 501 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 CRADDP78560 199 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 IFFO1Q0D2I5 559 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 GPR176Q14439 515 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 PSG3Q16557 428 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 TAL2Q16559 108 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 DEFB116Q30KQ4 102 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 DEGS2Q6QHC5 323 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 NTM-AS1Q6ZSK4 140 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 Q8N7P7 452 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 OR6K2Q8NGY2 324 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 COQ8AQ8NI60 647 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 CDKL2Q92772 493 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 TMEM243Q9BU79 118 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 SLC17A9Q9BYT1 436 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 ARV1Q9H2C2 271 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 SIGLEC9Q9Y336 463 aa3.24□□□□□ -1.89
SCFD1-209ENST00000553280 EIF4G1Q04637 1599 aaKnown RBP3.24□□□□□ -1.89
SCFD1-209ENST00000553280 IGLV4-69A0A075B6H9 119 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 IGHV1OR15-9A0A0B4J2B8 117 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 IGKV6D-41A0A0C4DH26 115 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 SOCS1O15524 211 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 SC5DO75845 299 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 SLC35G6P0C7Q6 338 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 AZU1P20160 251 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 PCK1P35558 622 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 MLF1P58340 268 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 SLC35A1P78382 337 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 MECOMQ03112 1051 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 LOXL1Q08397 574 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-209ENST00000553280 DMTNQ08495 405 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 SIGLEC14Q08ET2 396 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 MAD2L1BPQ15013 274 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-209ENST00000553280 RBMY1FQ15415 496 aaKnown RBP3.23□□□□□ -1.89
SCFD1-209ENST00000553280 FAM27D1Q5T7N8 215 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 STEAP4Q687X5 459 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 IGFL2Q6UWQ7 119 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 RTL4Q6ZR62 310 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 Q6ZVH6 145 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 CALHM1Q8IU99 346 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 DRAXINQ8NBI3 349 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-209ENST00000553280 OR6N1Q8NGY5 312 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 RXFP2Q8WXD0 754 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 RERGQ96A58 199 aaPredicted RBP3.23□□□□□ -1.89
SCFD1-209ENST00000553280 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 PLA2G2FQ9BZM2 168 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 OR52D1Q9H346 318 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 VAPAQ9P0L0 249 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 ZNRD1Q9P1U0 126 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 HES2Q9Y543 173 aa3.23□□□□□ -1.89
SCFD1-209ENST00000553280 MTCL1Q9Y4B5 1905 aaKnown RBP3.23□□□□□ -1.89
SCFD1-209ENST00000553280 IGKV1-27A0A075B6S5 117 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms