RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 SLC18B1Q6NT16 456 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 WDR82Q6UXN9 313 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 TMEM219Q86XT9 240 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 DPP10Q8N608 796 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 FAM156AQ8NDB6 213 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 DUS3LQ96G46 650 aaKnown RBP10.43□□□□□ -0.74
VPS29-211ENST00000553128 RCC1LQ96I51 464 aaKnown RBP10.43□□□□□ -0.74
VPS29-211ENST00000553128 PRRC1Q96M27 445 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 PITX2Q99697 317 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 ATF6BQ99941 703 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 ELL3Q9HB65 397 aaPredicted RBP10.43□□□□□ -0.74
VPS29-211ENST00000553128 SNTG1Q9NSN8 517 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 MRPL15Q9P015 296 aaKnown RBP10.43□□□□□ -0.74
VPS29-211ENST00000553128 BAG5Q9UL15 447 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
VPS29-211ENST00000553128 NOP16Q9Y3C1 178 aaKnown RBP10.43□□□□□ -0.74
VPS29-211ENST00000553128 STAB2Q8WWQ8 2551 aa10.43□□□□□ -0.74
VPS29-211ENST00000553128 A0A087WUU8 490 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 IGLV1-36A0A0B4J1U3 117 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 A0A1W2PQ09 198 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 FFAR1O14842 300 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 SDHAP31040 664 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 BLCAPP62952 87 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 AANATQ16613 207 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 ANKDD1AQ495B1 522 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 LRRC10Q5BKY1 277 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 NKAPLQ5M9Q1 402 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 RNF144BQ7Z419 303 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 TSEN54Q7Z6J9 526 aaKnown RBP10.42□□□□□ -0.74
VPS29-211ENST00000553128 OR56B2PQ8NGI1 322 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 OR9Q1Q8NGQ5 310 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 GAFA1Q96PS6 74 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 WDR13Q9H1Z4 485 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 MUC13Q9H3R2 512 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 ZNF391Q9UJN7 358 aa10.42□□□□□ -0.74
VPS29-211ENST00000553128 HTR3EA5X5Y0 456 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 E9PQ18 207 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 M0R135 149 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 BHLHE40O14503 412 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 PF4P02776 101 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 FAHP16930 419 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 FXYD6P3P58550 94 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 ERVFRD-1P60508 538 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 RFX4Q33E94 735 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 RABL3Q5HYI8 236 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 CASC10Q5T4H9 136 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 ATPAF1Q5TC12 328 aaPredicted RBP10.41□□□□□ -0.74
VPS29-211ENST00000553128 LIAT1Q6ZQX7 453 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 CCDC121Q6ZUS5 278 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 LHFPL4Q7Z7J7 247 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 SLC26A10Q8NG04 563 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 OR1M1Q8NGA1 313 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 ZNF799Q96GE5 643 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 MAP6Q96JE9 813 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 RNPEPL1Q9HAU8 725 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 NRIP3Q9NQ35 241 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 SLC25A10Q9UBX3 287 aaPredicted RBP10.41□□□□□ -0.74
VPS29-211ENST00000553128 IER3IP1Q9Y5U9 82 aa10.41□□□□□ -0.74
VPS29-211ENST00000553128 TRBV23-1A0A0A0MS06 115 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 A6NDX4 124 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 H0YAE9 185 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 CDIPTO14735 213 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 PTP4A3O75365 173 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 PEX14O75381 377 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 CCDC159P0C7I6 412 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 NDUFB7P17568 137 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 RPS27P42677 84 aaKnown RBP10.4□□□□□ -0.74
VPS29-211ENST00000553128 TPTEP56180 551 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 NFYCQ13952 458 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 CNN3Q15417 329 aaKnown RBP10.4□□□□□ -0.74
VPS29-211ENST00000553128 CYBRD1Q53TN4 286 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 ZNF788Q6ZQV5 615 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 TMPRSS11FQ6ZWK6 438 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 DPY19L4Q7Z388 723 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 OFCC1Q8IZS5 231 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 OR6V1Q8N148 313 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 MREGQ8N565 214 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 OR5AU1Q8NGC0 362 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 TPD52L3Q96J77 140 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 CCDC28BQ9BUN5 200 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 SRA1Q9HD15 236 aaKnown RBP10.4□□□□□ -0.74
VPS29-211ENST00000553128 C14orf119Q9NWQ9 140 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 HAO2Q9NYQ3 351 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 CYB5R1Q9UHQ9 305 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 B9D1Q9UPM9 204 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 TCF19Q9Y242 345 aa10.4□□□□□ -0.74
VPS29-211ENST00000553128 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 SYNGR1O43759 233 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 CHRM2P08172 466 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 SLC2A1P11166 492 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 PSKH1P11801 424 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 POU1F1P28069 291 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 MXRA7P84157 204 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 TRAM2Q15035 370 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 LRRC23Q53EV4 343 aaPredicted RBP10.39□□□□□ -0.75
VPS29-211ENST00000553128 NANOGP8Q6NSW7 305 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 ZNF730Q6ZMV8 503 aa10.39□□□□□ -0.75
VPS29-211ENST00000553128 MBOAT2Q6ZWT7 520 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms