RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CCBE1Q6UXH8 406 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 TFAP2EQ6VUC0 442 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 Q6ZT83 130 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 SPATC1Q76KD6 591 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 NAA40Q86UY6 237 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 SNX29P2Q8IUI4 249 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 MCEMP1Q8IX19 187 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 PAQR4Q8N4S7 273 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 FAM89BQ8N5H3 189 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 ZNF433Q8N7K0 673 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 CPEB3Q8NE35 698 aaKnown RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 DNAAF1Q8NEP3 725 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 OR1K1Q8NGR3 316 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 ZNF671Q8TAW3 534 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 POM121L2Q96KW2 1035 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 C1orf147Q96MC9 270 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 ALKBH3Q96Q83 286 aaPredicted RBP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 MARVELD1Q9BSK0 173 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 CHST5Q9GZS9 411 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 OPA3Q9H6K4 179 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 OBP2BQ9NPH6 170 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.54□□□□□ -1.04
TMEM116-216ENST00000552800 RHBDL2Q9NX52 303 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 RAB22AQ9UL26 194 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 LOC400499M0QZD8 3231 aa8.54□□□□□ -1.04
TMEM116-216ENST00000552800 MYO7BQ6PIF6 2116 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 IGKV1-9A0A0C4DH69 117 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 F5H5K5 113 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 CTAG2O75638 210 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 ECDO95905 644 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-216ENST00000552800 CHRM2P08172 466 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 B4GALT1P15291 398 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 POU3F4P49335 361 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 BCAP31P51572 246 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 TGFBR3Q03167 851 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-216ENST00000552800 ACSF3Q4G176 576 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-216ENST00000552800 GLYATL3Q5SZD4 288 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 HES5Q5TA89 166 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 FAM57BQ71RH2 274 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 C1orf174Q8IYL3 243 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 OR8H2Q8N162 312 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 C19orf18Q8NEA5 215 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 OR51D1Q8NGF3 324 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 OR51A2Q8NGJ7 313 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 SYNPRQ8TBG9 265 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 PIGTQ969N2 578 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 RFT1Q96AA3 541 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 SPSB1Q96BD6 273 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 PGAM5Q96HS1 289 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 SPOCK3Q9BQ16 436 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 SLC22A4Q9H015 551 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 C11orf54Q9H0W9 315 aaPredicted RBP8.53□□□□□ -1.04
TMEM116-216ENST00000552800 SLC25A18Q9H1K4 315 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 SCPEP1Q9HB40 452 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 MOV10Q9HCE1 1003 aaKnown RBP8.53□□□□□ -1.04
TMEM116-216ENST00000552800 DIABLOQ9NR28 239 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 C14orf119Q9NWQ9 140 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 COPZ2Q9P299 210 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 UPB1Q9UBR1 384 aa8.53□□□□□ -1.04
TMEM116-216ENST00000552800 ACACAQ13085 2346 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 LOC100509620A0A075B734 347 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 TMEM272A0A1B0GTI8 110 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 hCG_38984A0A1B0GV85 526 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 NAP1L6A6NFF2 107 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 GGT3PA6NGU5 568 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 PRSS44E7EML9 344 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 H7C417 338 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 RAB27BO00194 218 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 RRP8O43159 456 aaKnown RBP8.52□□□□□ -1.05
TMEM116-216ENST00000552800 ORC5O43913 435 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 CA11O75493 328 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 KRT33AO76009 404 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 WISP2O76076 250 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 DBHP09172 617 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 TRAPPC2P0DI81 140 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 TRAPPC2BP0DI82 140 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 ARSBP15848 533 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 ANOS1P23352 680 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 CEACAM8P31997 349 aaPredicted RBP8.52□□□□□ -1.05
TMEM116-216ENST00000552800 KIR2DL3P43628 341 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 MECP2P51608 486 aaKnown RBP8.52□□□□□ -1.05
TMEM116-216ENST00000552800 FOXG1P55316 489 aaPredicted RBP8.52□□□□□ -1.05
TMEM116-216ENST00000552800 BTG1P62324 171 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 RAB1AP62820 205 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 FAM3AP98173 230 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 PMP22Q01453 160 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 HGFACQ04756 655 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 FAPQ12884 760 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 KLF9Q13886 244 aaPredicted RBP8.52□□□□□ -1.05
TMEM116-216ENST00000552800 P2RY6Q15077 328 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 GABRA6Q16445 453 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 TBR1Q16650 682 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 SNAI3Q3KNW1 292 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 PLA1AQ53H76 456 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 PABPC1L2AQ5JQF8 200 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 MZT2BQ6NZ67 158 aa8.52□□□□□ -1.05
TMEM116-216ENST00000552800 TMEM53Q6P2H8 277 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms