RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 GTF2A1P52655 376 aaPredicted RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 DIO3P55073 304 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 STX17P56962 302 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 FADDQ13158 208 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 KIAA0040Q15053 153 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 MRPL23Q16540 153 aaKnown RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 C1orf146Q5VVC0 180 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 MLIPQ5VWP3 458 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 C11orf71Q6IPW1 123 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 BHLHA15Q7RTS1 189 aaPredicted RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 FAM220AQ7Z4H9 259 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 TMEM179BQ7Z7N9 219 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 ST13P4Q8IZP2 240 aaPredicted RBP3.95□□□□□ -1.78
CPSF6-206ENST00000550987 OFCC1Q8IZS5 231 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 EID2Q8N6I1 236 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 ZNF525Q8N782 197 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 OR2AP1Q8NGE2 309 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 PPP1R14BQ96C90 147 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 SMIM14Q96QK8 99 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 OR8B4Q96RC9 309 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 SORT1Q99523 831 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 ATP5SQ99766 215 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 SELENOSQ9BQE4 189 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 EBF4Q9BQW3 602 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 ACBD6Q9BR61 282 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 NICN1Q9BSH3 213 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 TSGA10Q9BZW7 698 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 IL22Q9GZX6 179 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 XPNPEP1Q9NQW7 623 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 CTSFQ9UBX1 484 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 VANGL2Q9ULK5 521 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 CSAG2Q9Y5P2 127 aa3.95□□□□□ -1.78
CPSF6-206ENST00000550987 SCN8AQ9UQD0 1980 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 C1orf232A0A0U1RR37 186 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 TLCD2A6NGC4 264 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 LAD1O00515 517 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 CCL21O00585 134 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 DLGAP1O14490 977 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 MGRN1O60291 552 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 C1orf105O95561 183 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 MBP02144 154 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 PRDX3P30048 256 aaKnown RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 ARL2P36404 184 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 CRATP43155 626 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 KIR2DS4P43632 304 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 HSPA13P48723 471 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 KLK7P49862 253 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 MEOX2P50222 304 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 RAB9AP51151 201 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 CCNG1P51959 295 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 KDSRQ06136 332 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 PDIA2Q13087 525 aaKnown RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 KYAT1Q16773 422 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 HIKESHIQ53FT3 197 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 SMUG1Q53HV7 270 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 C9orf135Q5VTT2 229 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 GSG1LQ6UXU4 331 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 SSX9Q7RTT3 188 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 BHLHA9Q7RTU4 235 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 LIX1Q8N485 282 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 OR5T1Q8NG75 326 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 OR52I1Q8NGK6 324 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 NDNFQ8TB73 568 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 SH3GL3Q99963 347 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 PELOQ9BRX2 385 aaKnown RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 HES7Q9BYE0 225 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 DEFB126Q9BYW3 111 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 NDEL1Q9GZM8 345 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 RANBP3Q9H6Z4 567 aaPredicted RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 PLGRKTQ9HBL7 147 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 C6orf50Q9HD87 102 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 DMAP1Q9NPF5 467 aaPredicted RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 ADAP2Q9NPF8 381 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 C20orf96Q9NUD7 363 aaPredicted RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 KIF25Q9UIL4 384 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 CLEC4EQ9ULY5 219 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 PACSIN2Q9UNF0 486 aaPredicted RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 SLC22A14Q9Y267 594 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 ASF1AQ9Y294 204 aa3.94□□□□□ -1.78
CPSF6-206ENST00000550987 TNRC6AQ8NDV7 1962 aaKnown RBP3.94□□□□□ -1.78
CPSF6-206ENST00000550987 TRAV25A0A0B4J276 109 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 A0A1W2PPV4 95 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 GOLGA8IPA6NC78 632 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 GOLGA6L4A6NEF3 574 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 NDUFAB1O14561 156 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 RAB29O14966 203 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 CALUO43852 315 aaPredicted RBP3.93□□□□□ -1.78
CPSF6-206ENST00000550987 FGGP02679 453 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 FGF1P05230 155 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 CLTAP09496 248 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 CT62P0C5K7 136 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 OR4Q2P0C623 313 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 CCNOP22674 350 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 COX7A1P24310 79 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 GABRR2P28476 465 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 HMOX2P30519 316 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 NAA10P41227 235 aaPredicted RBP3.93□□□□□ -1.78
CPSF6-206ENST00000550987 GPR4P46093 362 aa3.93□□□□□ -1.78
CPSF6-206ENST00000550987 YAP1P46937 504 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms