RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 MT-CO2P00403 227 aa10.9□□□□□ -0.66
NR4A1-215ENST00000550557 CELA2AP08217 269 aa10.9□□□□□ -0.66
NR4A1-215ENST00000550557 EVX1P49640 407 aa10.9□□□□□ -0.66
NR4A1-215ENST00000550557 TNFAIP6P98066 277 aaPredicted RBP10.9□□□□□ -0.66
NR4A1-215ENST00000550557 ZNF141Q15928 474 aa10.9□□□□□ -0.66
NR4A1-215ENST00000550557 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
NR4A1-215ENST00000550557 KIRREL1Q96J84 757 aa10.9□□□□□ -0.66
NR4A1-215ENST00000550557 ZNF816-ZNF321PA0A0X1KG74 233 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 SSX4O60224 188 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 CRYBB2P43320 205 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 ACTBL2Q562R1 376 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 PABPC1L2AQ5JQF8 200 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 MRGPRGQ86SM5 289 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 LGALS14Q8TCE9 139 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF681Q96N22 645 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 AP1S3Q96PC3 154 aa10.9□□□□□ -0.67
NR4A1-215ENST00000550557 MYOZ1Q9NP98 299 aaPredicted RBP10.9□□□□□ -0.67
NR4A1-215ENST00000550557 NBASA2RRP1 2371 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 INTS1Q8N201 2190 aaKnown RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 A0A0D9SG52 128 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 HNF1AP20823 631 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 OR2T2Q6IF00 324 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 RFPL4BQ6ZWI9 263 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SIGLEC11Q96RL6 698 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 PDCD1LG2Q9BQ51 273 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 EXOSC3Q9NQT5 275 aaKnown RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ASF1BQ9NVP2 202 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 KIR2DS1A0A191URI9 304 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 A0A1W2PQD3 144 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 HRKO00198 91 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SNAPINO95295 136 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 GLAP06280 429 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 GAAP10253 952 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF32P17041 273 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 KIR2DS4P43632 304 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 CCR6P51684 374 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SCGB2A2Q13296 93 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 KIR2DS1Q14954 304 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 LHFPL2Q6ZUX7 228 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 GABRG1Q8N1C3 465 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 TMEM251Q8N6I4 163 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ARHGDIGQ99819 225 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ADAT1Q9BUB4 502 aaKnown RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ACOXLQ9NUZ1 547 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 TAAR3PQ9P1P4 343 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 TDRD6O60522 2096 aaKnown RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 ZC3H12DA2A288 527 aaKnown RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SPDEFO95238 335 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 GZMKP49863 264 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 PSG6Q00889 435 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SLC25A26Q70HW3 274 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 GLCCI1Q86VQ1 547 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 SAV1Q9H4B6 383 aaPredicted RBP10.89□□□□□ -0.67
NR4A1-215ENST00000550557 NTMQ9P121 344 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 GREB1Q4ZG55 1949 aa10.89□□□□□ -0.67
NR4A1-215ENST00000550557 KRBOX1C9JBD0 128 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 PDGFAP04085 211 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 CAMK2BQ13554 666 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 NUFIP2Q7Z417 695 aaKnown RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 C9orf40Q8IXQ3 194 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 RDH10Q8IZV5 341 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 UPRTQ96BW1 309 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 JAM3Q9BX67 310 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 ZCCHC4Q9H5U6 513 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 KIF25Q9UIL4 384 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 ING1Q9UK53 422 aaPredicted RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF318Q5VUA4 2279 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 CALCBP10092 127 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 PEA15Q15121 130 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 PCK2Q16822 640 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 KRBOX4Q5JUW0 171 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 BTNL3Q6UXE8 466 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 SSX8Q7RTT4 187 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 UBE3DQ7Z6J8 389 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 OR1M1Q8NGA1 313 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 OR4A16Q8NH70 328 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 GMPPAQ96IJ6 420 aaPredicted RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 S1PR3Q99500 378 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 SF3B5Q9BWJ5 86 aaKnown RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 PBOV1Q9GZY1 135 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 ONECUT1Q9UBC0 465 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 CGGBP1Q9UFW8 167 aaPredicted RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 LSM5Q9Y4Y9 91 aaKnown RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 A0A0A6YYJ9 748 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 AHRRA9YTQ3 701 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 LUMP51884 338 aaPredicted RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 HCCSP53701 268 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 BCL2A1Q16548 175 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 ZXDCQ2QGD7 858 aaPredicted RBP10.88□□□□□ -0.67
NR4A1-215ENST00000550557 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 C20orf85Q9H1P6 137 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 FBXL2Q9UKC9 423 aa10.88□□□□□ -0.67
NR4A1-215ENST00000550557 SLCO1B1Q9Y6L6 691 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms