RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 NOXO1Q8NFA2 376 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SPACA9Q96E40 222 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 C19orf43Q9BQ61 176 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 IKZF5Q9H5V7 419 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SLC25A19Q9HC21 320 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 ZDHHC11BP0C7U3 371 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 RAB5AP20339 215 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 BTG2P78543 158 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF90Q03938 601 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 RDH5Q92781 318 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TMPRSS11DO60235 418 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SOWAHCQ53LP3 525 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 ONECUT1Q9UBC0 465 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TMEM127O75204 238 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 H3F3AP84243 136 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 ANKUB1A6NFN9 424 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 CRYABP02511 175 aaKnown RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 EMP3P54852 163 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 FAM162BQ5T6X4 162 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 STAC2Q6ZMT1 411 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 FYTTD1Q96QD9 318 aaKnown RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SPACA5Q96QH8 159 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 CHRDL1Q9BU40 450 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TEX101Q9BY14 249 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 LMO7DNF2Z398 122 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TRAPPC2P0DI81 140 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TRAPPC2BP0DI82 140 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SUMO3P55854 103 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SLC17A1Q14916 467 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 RGS7BPQ6MZT1 257 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 LINC00615Q96LM1 132 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 FUT6P51993 359 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 TIGD3Q6B0B8 471 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 SYS1Q8N2H4 156 aa11.31□□□□□ -0.6
RAB3IP-212ENST00000550536 IGHV3-64DA0A0J9YX35 117 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 G3V3Q6 166 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 LRP3O75074 770 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 COX5AP20674 150 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 ACSM5Q6NUN0 579 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 TMEM123Q8N131 208 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 RNF167Q9H6Y7 350 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 A0A1B0GUH1 482 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 RRASP10301 218 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 Q6ZNB5 142 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 AQP7P3A6NL99 342 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 CYTIPO60759 359 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 CLDN15P56746 228 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 PPP2CBP62714 309 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 PPP2CAP67775 309 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 Q8IYB0 196 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 OSR2Q8N2R0 312 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 C10orf90Q96M02 699 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 NTN4Q9HB63 628 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF586Q9NXT0 402 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 SLC25A37Q9NYZ2 338 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 TIMM9Q9Y5J7 89 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 A0A0A6YYD5 115 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 H7BYZ3 331 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 DRAM2Q6UX65 266 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 APOBEC3DQ96AK3 386 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 CTSLP07711 333 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 PDZK1IP1Q13113 114 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 ELFN2Q5R3F8 820 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 NT5CQ8TCD5 201 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 ISG20L2Q9H9L3 353 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 UPK1AO00322 258 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 FABP5Q01469 135 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 PTDSS2Q9BVG9 487 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 POMT2Q9UKY4 750 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 TRAV1-2A0A0B4J238 106 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 LRRC3CA6NJW4 275 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 SH2D7A6NKC9 451 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 RPL34P49207 117 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 NOVA1P51513 510 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 RNPS1Q15287 305 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 OR52N5Q8NH56 324 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 POM121L2Q96KW2 1035 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 COL11A2P13942 1736 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 HMX2A2RU54 273 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 SERPINE3A8MV23 424 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 SNRPGP15A8MWD9 76 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 SDCBPO00560 298 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 HRO43593 1189 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 IGLV3-25P01717 112 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 MGMTP16455 207 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 LYG2Q86SG7 212 aa11.3□□□□□ -0.6
RAB3IP-212ENST00000550536 ZNF727A8MUV8 499 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 M0QZ24 198 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 ARRB2P32121 409 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 AQP6Q13520 282 aa11.29□□□□□ -0.6
RAB3IP-212ENST00000550536 ALKBH6Q3KRA9 238 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms