RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 GYPBP06028 91 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 GRPP07492 148 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 MUC1P15941 1255 aaPredicted RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 CFHR2P36980 270 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 GNALP38405 381 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 NAA10P41227 235 aaPredicted RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRSS12P56730 875 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 FAM3AP98173 230 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 IL5RAQ01344 420 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 DBPQ10586 325 aaPredicted RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 PPP1R8Q12972 351 aaKnown RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 HNRNPA0Q13151 305 aaKnown RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 FAM201AQ5SY85 155 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 TEX36Q5VZQ5 186 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 SFRP4Q6FHJ7 346 aaPredicted RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 LYPD2Q6UXB3 125 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF841Q6ZN19 808 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 SLC16A9Q7RTY1 509 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 DPY19L4Q7Z388 723 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 ERI1Q8IV48 349 aaKnown RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 BCL6BQ8N143 479 aaPredicted RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 BOLLQ8N9W6 283 aaKnown RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR56B2PQ8NGI1 322 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR6N2Q8NGY6 317 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZDHHC16Q969W1 377 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 OTULINQ96BN8 352 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 SGK3Q96BR1 496 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 C12orf43Q96C57 262 aaKnown RBP9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 REEP6Q96HR9 211 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 NIPSNAP1Q9BPW8 284 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 ABHD6Q9BV23 337 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRDM13Q9H4Q3 707 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 TAS2R1Q9NYW7 299 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 KAAG1Q9UBP8 84 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 ARHGAP32A7KAX9 2087 aa9.06□□□□□ -0.96
VTI1BP3-201ENST00000550220 A0A1B0GUS0 222 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 hCG_1807616A0A1W2PRN6 198 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF879B4DU55 563 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRR23D1E9PI22 279 aaPredicted RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 ACOT8O14734 319 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 TNFRSF13BO14836 293 aaPredicted RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRODHO43272 600 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 ADAM20O43506 726 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 SPRY1O43609 319 aaPredicted RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 E2F6O75461 281 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 H2BFMP0C1H6 154 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRR23D2P0DMB1 279 aaPredicted RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 T-ENOLP0DO92 83 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 CLUP10909 449 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 SLC2A1P11166 492 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 ANXA8P13928 327 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 RBMXP38159 391 aaKnown RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 OPRL1P41146 370 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 FGF12P61328 243 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 GINS1Q14691 196 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 PDCD1Q15116 288 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 SLC9A3R2Q15599 337 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 MICBQ29980 383 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 SLC35D3Q5M8T2 416 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 C16orf87Q6PH81 154 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 LYPD4Q6UWN0 246 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 GALNT4Q8N4A0 578 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 TMEM86BQ8N661 226 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 OTOSQ8NHW6 89 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 DNAJC9Q8WXX5 260 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 CCDC124Q96CT7 223 aaKnown RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 FAM71F1Q96KD3 344 aaPredicted RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 TECTBQ96PL2 329 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 MICU1Q9BPX6 476 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 THTPAQ9BU02 230 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR51V1Q9H2C8 321 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 PDP1Q9P0J1 537 aaPredicted RBP9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 MPC1Q9Y5U8 109 aa9.05□□□□□ -0.96
VTI1BP3-201ENST00000550220 TRAV40A0A0B4J280 105 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 ACOD1A6NK06 481 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 C3orf80F5H4A9 247 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 TOX4O94842 621 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 CRYBA1P05813 215 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 LYNP07948 512 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 OSMP13725 252 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 POU1F1P28069 291 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 GSK3AP49840 483 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF121P58317 390 aaPredicted RBP9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 DNAL1Q4LDG9 190 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 DEGS2Q6QHC5 323 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 FAM57BQ71RH2 274 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 SPATC1Q76KD6 591 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 PRSS45Q7RTY3 260 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 SLC36A1Q7Z2H8 476 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 TIGD4Q8IY51 512 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 ADGRG5Q8IZF4 528 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 GCSAMQ8N6F7 178 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 OR1M1Q8NGA1 313 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 GATAD2BQ8WXI9 593 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 NRBF2Q96F24 287 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 PGAM5Q96HS1 289 aa9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 ZNF48Q96MX3 618 aaPredicted RBP9.04□□□□□ -0.96
VTI1BP3-201ENST00000550220 WDFY2Q96P53 400 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms