RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 PPP1R14AQ96A00 147 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 SPSB4Q96A44 273 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 C12orf43Q96C57 262 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 C7orf34Q96L11 122 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 CCL13Q99616 98 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 HOPXQ9BPY8 73 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 OPA3Q9H6K4 179 aa8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 KRCC1Q9NPI7 259 aaPredicted RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 RPRD1BQ9NQG5 326 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 MRPL22Q9NWU5 206 aaKnown RBP8.07□□□□□ -1.12
TRAFD1-207ENST00000550051 IGHV3OR15-7A0A075B7D8 119 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 hCG_1807616A0A1W2PRN6 198 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 ANKRD61A6NGH8 418 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 A6NLC8 198 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 GSTA4O15217 222 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 NDUFB3O43676 98 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 HLA-DQA2P01906 255 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 ZNF823P16415 610 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 AMY2BP19961 511 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 GABRA5P31644 462 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 UBE2E1P51965 193 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 EFNB2P52799 333 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 DBPQ10586 325 aaPredicted RBP8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 PCK2Q16822 640 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 FGD3Q5JSP0 725 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 WDR38Q5JTN6 314 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 C8orf82Q6P1X6 216 aaPredicted RBP8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 FGFRL1Q8N441 504 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 DTX3Q8N9I9 347 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 BEND2Q8NDZ0 799 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 OR2AE1Q8NHA4 323 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 RP9Q8TA86 221 aaKnown RBP8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 DDOQ99489 341 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 DCTN5Q9BTE1 182 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 DNTTIP1Q9H147 329 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 MEGF9Q9H1U4 602 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 SEMA6AQ9H2E6 1030 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 OR52D1Q9H346 318 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 ONECUT1Q9UBC0 465 aa8.06□□□□□ -1.12
TRAFD1-207ENST00000550051 ANKRD30BLA7E2S9 258 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 NME4O00746 187 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 NDUFAB1O14561 156 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 PIN1P1O15428 100 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 XRCC2O43543 280 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 TIPRLO75663 272 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 PAHP00439 452 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 TROVE2P10155 538 aaKnown RBP eCLIP8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 ANOS1P23352 680 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 SAA4P35542 130 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 NAA10P41227 235 aaPredicted RBP8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 GSK3BP49841 420 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 SLC7A2P52569 658 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 SMIM11AP58511 58 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM189A2Q15884 450 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 AANATQ16613 207 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 LRRC10Q5BKY1 277 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 WDR82Q6UXN9 313 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 DPY19L4Q7Z388 723 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 WDR86Q86TI4 376 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 CYB561A3Q8NBI2 242 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 OR56B2PQ8NGI1 322 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 PPP1R35Q8TAP8 253 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 LRRC29Q8WV35 223 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 RCN3Q96D15 328 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 KCNJ15Q99712 375 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM234AQ9H0X4 552 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 PPA2Q9H2U2 334 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 SIRT7Q9NRC8 400 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 ADA2Q9NZK5 511 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 CD300AQ9UGN4 299 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 MAB21L2Q9Y586 359 aa8.05□□□□□ -1.12
TRAFD1-207ENST00000550051 A0A1B0GW55 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 MEIOCA2RUB1 952 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 M0R1W7 72 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 ACOT8O14734 319 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L2P0CJ85 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L3P0CJ86 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L4P0CJ87 422 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L5P0CJ88 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L6P0CJ89 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L7P0CJ90 424 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 GSSP48637 474 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 LOXL3P58215 753 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 ELF3P78545 371 aaPredicted RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM3AP98173 230 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 EMX1Q04741 257 aaPredicted RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 KRT72Q14CN4 511 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 TEX30Q5JUR7 227 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 STUMQ69YW2 141 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 CRIP3Q6Q6R5 217 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 DUX4L9Q6RFH8 374 aaPredicted RBP8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM216BQ8N7L0 139 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 OR1M1Q8NGA1 313 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 OR4C15Q8NGM1 316 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 OR8S1Q8NH09 359 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 OR52J3Q8NH60 311 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 FANK1Q8TC84 345 aa8.04□□□□□ -1.12
TRAFD1-207ENST00000550051 FAM162AQ96A26 154 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms