RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SLC35D2Q76EJ3 337 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 FCRLAQ7L513 359 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 IFNEQ86WN2 208 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 BCL6BQ8N143 479 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TMEM185AQ8NFB2 350 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 OR51A2Q8NGJ7 313 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 OR6M1Q8NGM8 313 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 LYZL4Q96KX0 146 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SLC30A2Q9BRI3 323 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TINAGL1Q9GZM7 467 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 MED9Q9NWA0 146 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TAS2R16Q9NYV7 291 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 PIN1P1O15428 100 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TTRP02766 147 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 NR0B1P51843 470 aaKnown RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 CDH15P55291 814 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 DLX6P56179 175 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 FAM3BP58499 235 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 RBM39Q14498 530 aaKnown RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 OXA1LQ15070 435 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 C1QL3Q5VWW1 255 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 WDR53Q7Z5U6 358 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 MARCH9Q86YJ5 346 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SLC22A24Q8N4F4 322 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SPICQ8N5J4 248 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 ZDHHC22Q8N966 263 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 OR9Q2Q8NGE9 314 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 OR2G2Q8NGZ5 317 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 UFD1Q92890 307 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 MARS2Q96GW9 593 aaKnown RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF48Q96MX3 618 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 COPS4Q9BT78 406 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 SRRQ9GZT4 340 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TXNL4BQ9NX01 149 aaKnown RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TAS2R3Q9NYW6 316 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 AURKCQ9UQB9 309 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 DOCK7Q96N67 2140 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TRGV5A0A0B4J1U4 118 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 K7EPK0 472 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 GFRA3O60609 400 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 WNT11O96014 354 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 TCN2P20062 427 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 OR1D4P47884 311 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 IST1P53990 364 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 CLDN6P56747 220 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 IL13RA1P78552 427 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 HMGN3Q15651 99 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 MEP1BQ16820 701 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 NADK2Q4G0N4 442 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF771Q7L3S4 317 aaPredicted RBP4.19□□□□□ -1.74
SCAF11-212ENST00000549162 CD163Q86VB7 1156 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 FAM71E2Q8N5Q1 922 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 COA4Q9NYJ1 87 aa4.19□□□□□ -1.74
SCAF11-212ENST00000549162 A0A0B4J203 849 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 LOC100653049A0A140TA62 436 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OOSP1A8MZH6 123 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 H7C1Q1 480 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MFNGO00587 321 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 XRCC3O43542 346 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MTRF1O75570 445 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KRT34O76011 436 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KNG1P01042 644 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 IFI30P13284 250 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 ATF1P18846 271 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 CXCR1P25024 350 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 IL5RAQ01344 420 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SNTB1Q13884 538 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KRT80Q6KB66 452 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 TNFAIP8L2Q6P589 184 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 FIP1L1Q6UN15 594 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 GPX8Q8TED1 209 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR5P3Q8WZ94 311 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 TNFRSF13CQ96RJ3 184 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 BCL2L14Q9BZR8 327 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MRPL18Q9H0U6 180 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MIXL1Q9H2W2 232 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 LIN7CQ9NUP9 197 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MCUBQ9NWR8 336 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 ZNF221Q9UK13 617 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SH2D7A6NKC9 451 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 ARHGEF9O43307 516 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 NDUFA2O43678 99 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 AIREO43918 545 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 CLPTM1O96005 669 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 GNAO1P09471 354 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 OR8G3PP0DMU2 310 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MDKP21741 143 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 FCGR2BP31994 310 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SERPINB10P48595 397 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 RPS23P62266 143 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 MXRA7P84157 204 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 PITPNAQ00169 270 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 FHL3Q13643 280 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KLF9Q13886 244 aaPredicted RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 CEACAM21Q3KPI0 293 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 SGO1Q5FBB7 561 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 THOC7Q6I9Y2 204 aaKnown RBP4.18□□□□□ -1.74
SCAF11-212ENST00000549162 ANGPTL8Q6UXH0 198 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 KCTD8Q6ZWB6 473 aa4.18□□□□□ -1.74
SCAF11-212ENST00000549162 EXT2Q93063 718 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms