RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 NUDT9Q9BW91 350 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ACTR6Q9GZN1 396 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CLSTN2Q9H4D0 955 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 LRRC19Q9H756 370 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 PARVAQ9NVD7 372 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ASF1BQ9NVP2 202 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 QPCTLQ9NXS2 382 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 MTRF1LQ9UGC7 380 aaKnown RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CNOT1A5YKK6 2376 aaKnown RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CELSR3Q9NYQ7 3312 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 KIAA1549LQ6ZVL6 1849 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TNRC6BQ9UPQ9 1833 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TENM4Q6N022 2769 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 LAMA1P25391 3075 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 BPTFQ12830 3046 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 KALRNO60229 2985 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 A0A0J9YYE9 177 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 C1orf232A0A0U1RR37 186 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CCDC182A6NF36 153 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TLCD2A6NGC4 264 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 ERICH4A6NGS2 130 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 C12orf77C9JDV5 145 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 E7EQ34 232 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 MAST4O15021 2626 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CDK14O94921 469 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TMEM50AO95807 157 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 IGHV2-5P01817 119 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TRBC1P01850 177 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 KRT6AP02538 564 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CRYGBP07316 175 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CT62P0C5K7 136 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 STAG3L3P0CL85 134 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TROVE2P10155 538 aaKnown RBP eCLIP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 ICAM2P13598 275 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 FOLR1P15328 257 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF17P17021 662 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF7P17097 686 aaPredicted RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 KITLGP21583 273 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 VDAC2P45880 294 aaPredicted RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 HCAR3P49019 387 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TDGF1P3P51864 188 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 STC1P52823 247 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PLP1P60201 277 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PRPS1P60891 318 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 MAXP61244 160 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 RPL26P61254 145 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 UBE2IP63279 158 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CKAP4Q07065 602 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 XRCC4Q13426 336 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CACNA1EQ15878 2313 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 NRF1Q16656 503 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 C2orf83Q53S99 150 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 SPANXN2Q5MJ10 180 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 GPR157Q5UAW9 335 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PDPK2PQ6A1A2 396 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 Q6ZN92 141 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 ACP7Q6ZNF0 438 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF620Q6ZNG0 422 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PHF13Q86YI8 300 aaPredicted RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TRAPPC5Q8IUR0 188 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 FNDC5Q8NAU1 212 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 OR4F6Q8NGB9 312 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 KCNG3Q8TAE7 436 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 C19orf60Q96EN9 201 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 COX14Q96I36 57 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PLEKHA8Q96JA3 519 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 MBOAT4Q96T53 435 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 CHP1Q99653 195 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 NRTNQ99748 197 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 TIMM29Q9BSF4 260 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 NAT9Q9BTE0 207 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 HES7Q9BYE0 225 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 OR2AG1Q9H205 316 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PLGRKTQ9HBL7 147 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 NEK6Q9HC98 313 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 MRPL47Q9HD33 250 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 SLC40A1Q9NP59 571 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 IMP3Q9NV31 184 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 GPATCH2LQ9NWQ4 482 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 HRASLS2Q9NWW9 162 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 SLC7A8Q9UHI5 535 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 RPL26L1Q9UNX3 145 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 NEU3Q9UQ49 428 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 PPIL1Q9Y3C6 166 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 URB1O60287 2271 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 HELZ2Q9BYK8 2649 aaKnown RBP2.72□□□□□ -1.97
PTCH1-216ENST00000548379 HECTD1Q9ULT8 2610 aa2.72□□□□□ -1.97
PTCH1-216ENST00000548379 APC2O95996 2303 aa2.71□□□□□ -1.97
PTCH1-216ENST00000548379 IGHV5-51A0A0C4DH38 117 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 A0A0G2JN53 185 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KIR2DL5BA0A0G2JN68 375 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KIR2DL5BA0A0G2JPC4 375 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 OR6C74A6NCV1 312 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 OR2AG2A6NM03 316 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 RNF13O43567 381 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 DNAJB6O75190 326 aa2.71□□□□□ -1.98
PTCH1-216ENST00000548379 SOD1P00441 154 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms