RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZNF829Q3KNS6 432 aaPredicted RBP15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 PRAMEF6Q5VXH4 476 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 SSX6Q7RTT6 188 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 OR2T27Q8NH04 317 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 GAL3ST1Q99999 423 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 PBOV1Q9GZY1 135 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 FAM118AQ9NWS6 357 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 TMEM160Q9NX00 188 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 AASSQ9UDR5 926 aa15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 MRM2Q9UI43 246 aaKnown RBP15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRPF40B-206ENST00000547764 LOC100130705A0A1B0GUX0 176 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 A0A1W2PQL4 384 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 CYB5R3P00387 301 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 PNPP00491 289 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 IGHV2-5P01817 119 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 BTG1P62324 171 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 MFGE8Q08431 387 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 ZMYND11Q15326 602 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 MPPED2Q15777 294 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 LRRC36Q1X8D7 754 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 ZNF181Q2M3W8 571 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 MEDAGQ5VYS4 303 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 ZNF771Q7L3S4 317 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 LRRC28Q86X40 367 aaPredicted RBP15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 KLBQ86Z14 1044 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 SPERTQ8NA61 448 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 CSNK2A3Q8NEV1 391 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 OR10H4Q8NGA5 316 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 ERGIC1Q969X5 290 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 PPP1R14AQ96A00 147 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 RAB39BQ96DA2 213 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 LPAR2Q9HBW0 351 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 UFSP2Q9NUQ7 469 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 UBAP1Q9NZ09 502 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 ZNF391Q9UJN7 358 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 RHBDD3Q9Y3P4 386 aa15.76■□□□□ 0.11
PRPF40B-206ENST00000547764 A0A0U1RQV5 110 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 LRRC30A6NM36 301 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 DLGAP1O14490 977 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 SRSF10O75494 262 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 PTBP3O95758 552 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 GABRB1P18505 474 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 ACKR3P25106 362 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 MTNR1AP48039 350 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 LPCAT4Q643R3 524 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 PLEKHG7Q6ZR37 379 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 ENTHD1Q8IYW4 607 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 GALNT4Q8N4A0 578 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 Q8TCH9 128 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 PPP1R3EQ9H7J1 279 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 SMPD3Q9NY59 655 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 NUFIP1Q9UHK0 495 aaKnown RBP15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 R4GMQ9 66 aa15.75■□□□□ 0.11
PRPF40B-206ENST00000547764 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 SLC16A6O15403 523 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 FAM20BO75063 409 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 ZNF205O95201 554 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 KRT8P05787 483 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 MSMBP08118 114 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 DVL1P1P54792 670 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 CHRFAM7AQ494W8 412 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 TMEM155Q4W5P6 130 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 ZNF684Q5T5D7 378 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 PLPP7Q8NBV4 271 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 OR8S1Q8NH09 359 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 RHOXF1Q8NHV9 184 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 RNFT2Q96EX2 444 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 RDH12Q96NR8 316 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 PAPOLGQ9BWT3 736 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 G6PC2Q9NQR9 355 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 C14orf119Q9NWQ9 140 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 GTF2A1LQ9UNN4 478 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 JMJD1CQ15652 2540 aa15.74■□□□□ 0.11
PRPF40B-206ENST00000547764 SVEP1Q4LDE5 3571 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 LOC110117498-PIK3R3F6TDL0 507 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 MPZL2O60487 215 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 IGLV3-1P01715 115 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 TTRP02766 147 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 GRPP07492 148 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 IRF2P14316 349 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 PEX2P28328 305 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 GNALP38405 381 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 MDH2P40926 338 aaKnown RBP15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 ZNF85Q03923 595 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 MZT1Q08AG7 82 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 SNCBQ16143 134 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 FAM201AQ5SY85 155 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 FAM120AOSQ5T036 256 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 GLCCI1Q86VQ1 547 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 C1orf87Q8N0U7 546 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 FTMTQ8N4E7 242 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 KLHL36Q8N4N3 616 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 SPICQ8N5J4 248 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 YIPF7Q8N8F6 280 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 OR11L1Q8NGX0 322 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 OR51F2Q8NH61 342 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 OR51E1Q8TCB6 317 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 TMEM186Q96B77 213 aa15.73■□□□□ 0.11
PRPF40B-206ENST00000547764 SHARPINQ9H0F6 387 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms