RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 P2RX3P56373 397 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 NANOS3P60323 173 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 RPS25P62851 125 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 YIF1BQ5BJH7 314 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 OR2A2Q6IF42 318 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 TFAP2EQ6VUC0 442 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 TMEM91Q6ZNR0 172 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 USP43Q70EL4 1123 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 FAM220AQ7Z4H9 259 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 DPPA2Q7Z7J5 298 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 CATSPERDQ86XM0 798 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 KLBQ86Z14 1044 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 TUSC5Q8IXB3 177 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 KBTBD8Q8NFY9 601 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 OR6K3Q8NGY3 331 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 FAM57AQ8TBR7 257 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 ZCCHC14Q8WYQ9 949 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 RPL3LQ92901 407 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 EXTL1Q92935 676 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 DACT3Q96B18 629 aaPredicted RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 WBP1Q96G27 269 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 C4orf45Q96LM5 186 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 MROQ9BYG7 248 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 ULBP2Q9BZM5 246 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 SLIRPQ9GZT3 109 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 OR51E2Q9H255 320 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 KCNN2Q9H2S1 579 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 GPR35Q9HC97 309 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 B3GAT2Q9NPZ5 323 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 TXNL4BQ9NX01 149 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 ZNF224Q9NZL3 707 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 LRP12Q9Y561 859 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 INTS1Q8N201 2190 aaKnown RBP7.36□□□□□ -1.23
VPS29-203ENST00000546588 BOD1L1Q8NFC6 3051 aa7.36□□□□□ -1.23
VPS29-203ENST00000546588 A0A1B0GTH9 108 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 B9A039 149 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 PRSS44E7EML9 344 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 J3QLW9 94 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 WISP2O76076 250 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ZFPL1O95159 310 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 MPZL1O95297 269 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 SERPINA3P01011 423 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 MMP7P09237 267 aaPredicted RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 SPARCP09486 303 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 UCHL1P09936 223 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 COX5BP10606 129 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ZNF19P17023 458 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 CCL1P22362 96 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 CRYGSP22914 178 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 RPS27P42677 84 aaKnown RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 HCCSP53701 268 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 RAB4BP61018 213 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 NCS1P62166 190 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 RPS16P62249 146 aaKnown RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 CXADRP78310 365 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 FABP5Q01469 135 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ALKBH1Q13686 389 aaKnown RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 EIF2B1Q14232 305 aaKnown RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 MEP1BQ16820 701 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 TP53I3Q53FA7 332 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 TSPO2Q5TGU0 170 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 PAMR1Q6UXH9 720 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 CFAP77Q6ZQR2 320 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 IDO2Q6ZQW0 420 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 UTS2BQ765I0 119 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 PRSS45Q7RTY3 260 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 DCXRQ7Z4W1 244 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ABHD12BQ7Z5M8 362 aaPredicted RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 SLC38A6Q8IZM9 456 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 RNF152Q8N8N0 203 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 GJC3Q8NFK1 279 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 OR10H5Q8NGA6 315 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 OR6N1Q8NGY5 312 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 OR2G2Q8NGZ5 317 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 SMAP2Q8WU79 429 aaPredicted RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 RGP1Q92546 391 aaPredicted RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 SLAMF6Q96DU3 332 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ALKBH3Q96Q83 286 aaPredicted RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 TBX5Q99593 518 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ZNF416Q9BWM5 594 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 HDHD2Q9H0R4 259 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 ZCCHC4Q9H5U6 513 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 G6PC2Q9NQR9 355 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 SLC7A10Q9NS82 523 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 FAM206AQ9NX38 181 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 SLCO1C1Q9NYB5 712 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 NUFIP1Q9UHK0 495 aaKnown RBP7.35□□□□□ -1.23
VPS29-203ENST00000546588 GNG8Q9UK08 70 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 CAMK2AQ9UQM7 478 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 R4GMQ9 66 aa7.35□□□□□ -1.23
VPS29-203ENST00000546588 A0A075B6Q4 140 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 TRAV1-2A0A0B4J238 106 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 A0A0U1RQK1 487 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 ZNF320A2RRD8 509 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 OR6C6A6NF89 314 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 GABRPO00591 440 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 BET1O15155 118 aa7.34□□□□□ -1.23
VPS29-203ENST00000546588 SYNGR3O43761 229 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms