RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 A0A0U1RQV5 110 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 ISPDA4D126 451 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 LRRC30A6NM36 301 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 ANKRD30BLA7E2S9 258 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 PHYHO14832 338 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 THBS2P35442 1172 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 MDH2P40926 338 aaKnown RBP9.98□□□□□ -0.81
YBX3-217ENST00000546164 PMELP40967 661 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 GSK3AP49840 483 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 CDC42P60953 191 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 MZT1Q08AG7 82 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 POU4F2Q12837 409 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 HNRNPA0Q13151 305 aaKnown RBP9.98□□□□□ -0.81
YBX3-217ENST00000546164 OR8G1Q15617 311 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 SLC25A30Q5SVS4 291 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 ZNF322Q6U7Q0 402 aaPredicted RBP9.98□□□□□ -0.81
YBX3-217ENST00000546164 KRT74Q7RTS7 529 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 SLC35F2Q8IXU6 374 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 C1orf87Q8N0U7 546 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 MUC20Q8N307 709 aaPredicted RBP9.98□□□□□ -0.81
YBX3-217ENST00000546164 FTMTQ8N4E7 242 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 CSNK2A3Q8NEV1 391 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 OR8B12Q8NGG6 310 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 ZNF420Q8TAQ5 688 aaPredicted RBP9.98□□□□□ -0.81
YBX3-217ENST00000546164 C9orf16Q9BUW7 83 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 PATZ1Q9HBE1 687 aaKnown RBP9.98□□□□□ -0.81
YBX3-217ENST00000546164 BRD7Q9NPI1 651 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 HIF1ANQ9NWT6 349 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 CLN6Q9NWW5 311 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 FAM206AQ9NX38 181 aa9.98□□□□□ -0.81
YBX3-217ENST00000546164 CUBNO60494 3623 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 PPIAL4EA0A075B759 164 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 PPIAL4CA0A0B4J2A2 164 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 TMEM269A0A1B0GVZ9 245 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 F5H0A9 414 aaPredicted RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 PPIAL4DF5H284 164 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 PLPP2O43688 288 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 CYB5R3P00387 301 aaPredicted RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 IGLV3-1P01715 115 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 PPIAL4FP0DN26 164 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 RIDAP52758 137 aaKnown RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 SNRPGP62308 76 aaKnown RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 EGR3Q06889 387 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 ZNF829Q3KNS6 432 aaPredicted RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 KLHL36Q8N4N3 616 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 RFLNBQ8N5W9 214 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 OR11L1Q8NGX0 322 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 FAM81AQ8TBF8 368 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 RFKQ969G6 155 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 EME1Q96AY2 570 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 LPAR2Q9HBW0 351 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 TMEM165Q9HC07 324 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 G6PC2Q9NQR9 355 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 C14orf119Q9NWQ9 140 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 UBAP1Q9NZ09 502 aa9.97□□□□□ -0.81
YBX3-217ENST00000546164 POLR3KQ9Y2Y1 108 aaPredicted RBP9.97□□□□□ -0.81
YBX3-217ENST00000546164 WNK2Q9Y3S1 2297 aa9.96□□□□□ -0.81
YBX3-217ENST00000546164 FBN1P35555 2871 aaKnown RBP9.96□□□□□ -0.81
YBX3-217ENST00000546164 IGHV3-64DA0A0J9YX35 117 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 A8MXK9 166 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 ZNF670-ZNF695F2Z2N8 137 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 PSMD9O00233 223 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 FAM20BO75063 409 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 SRSF10O75494 262 aaKnown RBP9.96□□□□□ -0.82
YBX3-217ENST00000546164 FOXH1O75593 365 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 CST4P01036 141 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 IFNA2P01563 188 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 OR2T7P0C7T2 308 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 IRF2P14316 349 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 ATP6V1B1P15313 513 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 SRD5A1P18405 259 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 GATA3P23771 443 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 ACKR3P25106 362 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 RBMXP38159 391 aaKnown RBP9.96□□□□□ -0.82
YBX3-217ENST00000546164 CXCR4P61073 352 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 MPPED2Q15777 294 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 GFOD2Q3B7J2 385 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 ZNF404Q494X3 552 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 PRAMEF6Q5VXH4 476 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 ZBTB49Q6ZSB9 765 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 OR51G2Q8NGK0 314 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 OR2T27Q8NH04 317 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 LYZL4Q96KX0 146 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 MBOAT4Q96T53 435 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 SLC29A1Q99808 456 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 MOB1AQ9H8S9 216 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 ABCB9Q9NP78 766 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 IMPAD1Q9NX62 359 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 NUFIP1Q9UHK0 495 aaKnown RBP9.96□□□□□ -0.82
YBX3-217ENST00000546164 IKZF2Q9UKS7 526 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.96□□□□□ -0.82
YBX3-217ENST00000546164 RHBDD3Q9Y3P4 386 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 PPIAL4AQ9Y536 164 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 MPC1Q9Y5U8 109 aa9.96□□□□□ -0.82
YBX3-217ENST00000546164 A0A0G2JMP0 313 aa9.95□□□□□ -0.82
YBX3-217ENST00000546164 A0A0X1KG70 313 aa9.95□□□□□ -0.82
YBX3-217ENST00000546164 CEACAM18A8MTB9 384 aa9.95□□□□□ -0.82
YBX3-217ENST00000546164 KIAA1324LA8MWY0 1029 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms