RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 TRAV38-1A0A0B4J264 116 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 A0A1W2PPL8 197 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 IQCF6A8MYZ5 107 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 CENPBD1B2RD01 187 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 NDUFA2O43678 99 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 SYNGR1O43759 233 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 DOK2O60496 412 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 LYPD3O95274 346 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 THY1P04216 161 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 COX5BP10606 129 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 AQP2P41181 271 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 RGS6P49758 472 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 BLCAPP62952 87 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 FLOT2Q14254 428 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 ZSCAN26Q16670 478 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 ZNF826PQ6ZT77 177 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 ASRGL1Q7L266 308 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 NANOGNBQ7Z5D8 188 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 FAM156AQ8NDB6 213 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 GPR32P1Q8NGA4 272 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 MYDGFQ969H8 173 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 ERGIC1Q969X5 290 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 CCDC124Q96CT7 223 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 PYURFQ96I23 114 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 MAGIXQ9H6Y5 334 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 ZNF229Q9UJW7 825 aa12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 FAM32AQ9Y421 112 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-216ENST00000545663 KIAA1109Q2LD37 5005 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 HTR3EA5X5Y0 456 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 C12orf71A8MTZ7 269 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 NCK1P16333 377 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 CD200P41217 278 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 CRYBA2P53672 197 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 FAM98BQ52LJ0 330 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 ETV3LQ6ZN32 361 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 FAM216BQ8N7L0 139 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 CELF2-AS1Q8N7Q2 184 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 MOSPD2Q8NHP6 518 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 MPP4Q96JB8 637 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 COG8Q96MW5 612 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 MCHR1Q99705 422 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 GPR61Q9BZJ8 451 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 POMPQ9Y244 141 aa12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
CLSTN3-216ENST00000545663 TRAPPC13A5PLN9 417 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 SGCEO43556 437 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 OR5F1O95221 314 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 LHBP01229 141 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 MSR1P21757 451 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 VDAC2P45880 294 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 DAP3P51398 398 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 SMIM11AP58511 58 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 CNN3Q15417 329 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 AANATQ16613 207 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 PLA1AQ53H76 456 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 ARSJQ5FYB0 599 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 LIAT1Q6ZQX7 453 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 FOXL2NBQ6ZUU3 175 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 OR6T1Q8NGN1 323 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 RASD2Q96D21 266 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 HSH2DQ96JZ2 352 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 INIPQ9NRY2 104 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 C1orf123Q9NWV4 160 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 KAAG1Q9UBP8 84 aa12.38□□□□□ -0.43
CLSTN3-216ENST00000545663 ACOT8O14734 319 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 CLIC3O95833 236 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 RHCEP18577 417 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 TAS2R41P59536 307 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 ST3GAL3Q11203 375 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 IKZF1Q13422 519 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 C1orf146Q5VVC0 180 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 TTC33Q6PID6 262 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 SYT9Q86SS6 491 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 TSPYL5Q86VY4 417 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 GCSAMQ8N6F7 178 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 PRRC1Q96M27 445 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 ANKRD19PQ9H560 264 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 TRIM36Q9NQ86 728 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 POLE4Q9NR33 117 aa12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-216ENST00000545663 CPSF4LA6NMK7 179 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 M0R3H8 397 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 CHP2O43745 196 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 SELLP14151 372 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 MS4A2Q01362 244 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 TOP3AQ13472 1001 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 GK3PQ14409 553 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 LAPTM4AQ15012 233 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 WDR38Q5JTN6 314 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 ENTPD8Q5MY95 495 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 NCR3LG1Q68D85 454 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 CYP2R1Q6VVX0 501 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 VTCN1Q7Z7D3 282 aa12.36□□□□□ -0.43
CLSTN3-216ENST00000545663 ADAMTS16Q8TE57 1224 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms