RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 FMO3P31513 532 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 GRK5P34947 590 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SRP14P37108 136 aaKnown RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SLC6A9P48067 706 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SRP9P49458 86 aaKnown RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 ENTPD1P49961 510 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 TPTEP56180 551 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 BTG1P62324 171 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 GK2Q14410 553 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF181Q2M3W8 571 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 RSPO1Q2MKA7 263 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 TMEM155Q4W5P6 130 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 TEX30Q5JUR7 227 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 OR2T2Q6IF00 324 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SHQ1Q6PI26 577 aaKnown RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 DRAM2Q6UX65 266 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 PHC2Q8IXK0 858 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 OR5AS1Q8N127 324 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 MUC20Q8N307 709 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SPICQ8N5J4 248 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 RFLNBQ8N5W9 214 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 OR10AD1Q8NGE0 317 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 OR10S1Q8NGN2 331 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 OR9Q1Q8NGQ5 310 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 OR6K6Q8NGW6 343 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 CANT1Q8WVQ1 401 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 ITLN1Q8WWA0 313 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF799Q96GE5 643 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF582Q96NG8 517 aaPredicted RBP6.46□□□□□ -1.38
SNHG1-223ENST00000545440 FEVQ99581 238 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 NIPSNAP1Q9BPW8 284 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 SLC30A2Q9BRI3 323 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 YY1AP1Q9H869 796 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 LPAR2Q9HBW0 351 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 G6PC2Q9NQR9 355 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 CMC2Q9NRP2 79 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 PPP1R3CQ9UQK1 317 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 STAB1Q9NY15 2570 aa6.46□□□□□ -1.38
SNHG1-223ENST00000545440 PPIAL4EA0A075B759 164 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PPIAL4CA0A0B4J2A2 164 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 TCRBV3S1A0A5B6 114 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 TVP23AA6NH52 213 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 A8MXK9 166 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 B5MCH6 92 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF878C9JN71 531 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PPIAL4DF5H284 164 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 H3BN98 237 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 H3BUI4 141 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 GNGT2O14610 69 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 MLNRO43193 412 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PLPP2O43688 288 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 E2F6O75461 281 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 FOXH1O75593 365 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 FSTL3O95633 263 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 LCATP04180 440 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 GYPBP06028 91 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 SPARCP09486 303 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PPIAL4FP0DN26 164 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PSKH1P11801 424 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 CPT2P23786 658 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 MDH2P40926 338 aaKnown RBP6.45□□□□□ -1.38
SNHG1-223ENST00000545440 RPS27P42677 84 aaKnown RBP6.45□□□□□ -1.38
SNHG1-223ENST00000545440 GRB2P62993 217 aaKnown RBP6.45□□□□□ -1.38
SNHG1-223ENST00000545440 KRTAP24-1Q3LI83 254 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 LINC01590Q5TEZ4 76 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PGAP1Q75T13 922 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 RHOUQ7L0Q8 258 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 MRPL21Q7Z2W9 205 aaKnown RBP6.45□□□□□ -1.38
SNHG1-223ENST00000545440 DCXRQ7Z4W1 244 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 SPATA24Q86W54 205 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 ATG16L2Q8NAA4 619 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 ZBTB34Q8NCN2 500 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 BHLHE23Q8NDY6 225 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 OR51L1Q8NGJ5 315 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 ST7LQ8TDW4 575 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 ZNRF4Q8WWF5 429 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 DNAJC9Q8WXX5 260 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 SLAMF6Q96DU3 332 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 COPS4Q9BT78 406 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 SLC22A4Q9H015 551 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 OPA3Q9H6K4 179 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 WDR76Q9H967 626 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 MARCH7Q9H992 704 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 DCAF16Q9NXF7 216 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 UBAP1Q9NZ09 502 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 PDP1Q9P0J1 537 aaPredicted RBP6.45□□□□□ -1.38
SNHG1-223ENST00000545440 POMPQ9Y244 141 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 NOP16Q9Y3C1 178 aaKnown RBP6.45□□□□□ -1.38
SNHG1-223ENST00000545440 DSCAML1Q8TD84 2053 aa6.45□□□□□ -1.38
SNHG1-223ENST00000545440 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 LRRC30A6NM36 301 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 F5H0A9 414 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 TMEM178BH3BS89 294 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 ZNF593O00488 134 aaPredicted RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 XRCC2O43543 280 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 TCF21O43680 179 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 FKBP6O75344 327 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 GLCEO94923 617 aa6.44□□□□□ -1.38
SNHG1-223ENST00000545440 PTBP3O95758 552 aaKnown RBP6.44□□□□□ -1.38
SNHG1-223ENST00000545440 CLUP10909 449 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms