RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TMEM61Q8N0U2 210 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 PNKDQ8N490 385 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 PRELID2Q8N945 189 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 C8orf31Q8N9H6 132 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 OR4C6Q8NH72 309 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 LYPD6BQ8NI32 183 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 FANK1Q8TC84 345 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 CXorf40AQ8TE69 158 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 NAT6Q93015 286 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 MARC2Q969Z3 335 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 C16orf74Q96GX8 76 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 ANKRD36BP1Q96IX9 119 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 RGCCQ9H4X1 137 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 RANBP3Q9H6Z4 567 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-222ENST00000545308 SIAEQ9HAT2 523 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 UGT1A7Q9HAW7 530 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 UGT1A8Q9HAW9 530 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 ASCL3Q9NQ33 180 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 RPS10P5Q9NQ39 176 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 GNPTGQ9UJJ9 305 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 ING4Q9UNL4 249 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 CDH10Q9Y6N8 788 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 SETD2Q9BYW2 2564 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-222ENST00000545308 PTPRJQ12913 1337 aa2.91□□□□□ -1.94
SNHG1-222ENST00000545308 NAV3Q8IVL0 2385 aa2.9□□□□□ -1.94
SNHG1-222ENST00000545308 TLN1Q9Y490 2541 aaKnown RBP2.9□□□□□ -1.94
SNHG1-222ENST00000545308 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.94
SNHG1-222ENST00000545308 SDK2Q58EX2 2172 aa2.9□□□□□ -1.94
SNHG1-222ENST00000545308 GLYATL1P3A0A0U1RQE8 302 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 ZNF816-ZNF321PA0A0X1KG74 233 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 SUPT7LO94864 414 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CCNB2O95067 398 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CD160O95971 181 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CRYGCP07315 174 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 ACSM4P0C7M7 580 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CISD3P0C7P0 127 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 UBCP0CG48 685 aaKnown RBP2.9□□□□□ -1.95
SNHG1-222ENST00000545308 MGMTP16455 207 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CD1BP29016 333 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 RBMXP38159 391 aaKnown RBP2.9□□□□□ -1.95
SNHG1-222ENST00000545308 PRPS1P60891 318 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 SLC25A11Q02978 314 aaKnown RBP2.9□□□□□ -1.95
SNHG1-222ENST00000545308 ECH1Q13011 328 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 NRF1Q16656 503 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 LCN12Q6JVE5 192 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 IL34Q6ZMJ4 242 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 TPGS1Q6ZTW0 290 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 BBS7Q8IWZ6 715 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 C14orf178Q8N769 122 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-222ENST00000545308 TMEM161BQ8NDZ6 487 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CCDC112Q8NEF3 446 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 OR56A4Q8NGH8 313 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 NEIL3Q8TAT5 605 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 DDI1Q8WTU0 396 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 MYDGFQ969H8 173 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 LRRC58Q96CX6 371 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 OR5B12Q96R08 314 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 UCK2Q9BZX2 261 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 ACTR3CQ9C0K3 210 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-222ENST00000545308 SLC7A5P2Q9GIP4 190 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 OR2AG1Q9H205 316 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 SLC25A22Q9H936 323 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 BEX1Q9HBH7 125 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CHRAC1Q9NRG0 131 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 CCL28Q9NRJ3 127 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 HRASLS2Q9NWW9 162 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 VSIG4Q9Y279 399 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 SLC25A15Q9Y619 301 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 ZFC3H1O60293 1989 aaKnown RBP2.9□□□□□ -1.95
SNHG1-222ENST00000545308 SCN8AQ9UQD0 1980 aa2.9□□□□□ -1.95
SNHG1-222ENST00000545308 RELNP78509 3460 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 A0A1B0GVI7 797 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 ZNF99A8MXY4 864 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-222ENST00000545308 FAM25EA8MYX2 175 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 F6UB75 175 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 F8VP50 259 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 MKRN2OSH3BPM6 223 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 SIVA1O15304 175 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 COCHO43405 550 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 CLDN11O75508 207 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 FCN3O75636 299 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 SCELO95171 688 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 TNNC2P02585 160 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 CTRB1P17538 263 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 PRKACAP17612 351 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 WARSP23381 471 aaKnown RBP2.89□□□□□ -1.95
SNHG1-222ENST00000545308 BCAP31P51572 246 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 UGT2B15P54855 530 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 FGF8P55075 233 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-222ENST00000545308 UBE2MP61081 183 aaKnown RBP2.89□□□□□ -1.95
SNHG1-222ENST00000545308 ADARB1P78563 741 aaKnown RBP2.89□□□□□ -1.95
SNHG1-222ENST00000545308 TFAMQ00059 246 aaKnown RBP2.89□□□□□ -1.95
SNHG1-222ENST00000545308 RAD51Q06609 339 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 ARFRP1Q13795 201 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 NSDHLQ15738 373 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 SLC1A5Q15758 541 aa2.89□□□□□ -1.95
SNHG1-222ENST00000545308 IGFBP7Q16270 282 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms