RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 RNF222A6NCQ9 220 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 TAAR5O14804 337 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 LMX1BO60663 402 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 SFT2D2O95562 160 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 IGHEP01854 428 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 RLN2P04090 185 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 CRHP06850 196 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 ZNF17P17021 662 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 POU3F2P20265 443 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-223ENST00000544669 PRKACBP22694 351 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 CPT2P23786 658 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 HOXA6P31267 233 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 DUSP3P51452 185 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-223ENST00000544669 DSCR4P56555 118 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-223ENST00000544669 Q7L0L9 218 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 GLRX5Q86SX6 157 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 OR5AS1Q8N127 324 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 SLC38A9Q8NBW4 561 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 OR52H1Q8NGJ2 320 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 OR14K1Q8NGZ2 314 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 EMG1Q92979 244 aaKnown RBP11.52□□□□□ -0.57
CPSF7-223ENST00000544669 SF3B5Q9BWJ5 86 aaKnown RBP11.52□□□□□ -0.57
CPSF7-223ENST00000544669 FOXQ1Q9C009 403 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 PCDHB16Q9NRJ7 776 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 DNAJB11Q9UBS4 358 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 FBXO4Q9UKT5 387 aa11.52□□□□□ -0.57
CPSF7-223ENST00000544669 FAM25EA8MYX2 175 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 CRTAPO75718 401 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-223ENST00000544669 DHRS3O75911 302 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 DKK1O94907 266 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 IGLV3-1P01715 115 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 NAT2P11245 290 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 AMY2BP19961 511 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 CCL7P80098 99 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 H3F3AP84243 136 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SHBQ15464 509 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SLC16A14Q7RTX9 510 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 RHBDD1Q8TEB9 315 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 RNF141Q8WVD5 230 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 ST8SIA4Q92187 359 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 TMEM54Q969K7 222 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 TM2D1Q9BX74 207 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 ANGPTL4Q9BY76 406 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 PNRC2Q9NPJ4 139 aaKnown RBP11.51□□□□□ -0.57
CPSF7-223ENST00000544669 C9J4A7 227 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 NPIPA2E9PIF3 369 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 F8VVB4 439 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 F8VWA3 439 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 NPIPA3F8WFD2 350 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 MFNGO00587 321 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SSX5O60225 188 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 PMP2P02689 132 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 PTGFRP43088 359 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 LUMP51884 338 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-223ENST00000544669 HIST1H3AP68431 136 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 HIST2H3PS2Q5TEC6 136 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 OR52W1Q6IF63 320 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 HIST2H3AQ71DI3 136 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 FAM57BQ71RH2 274 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 KCTD9Q7L273 389 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 GVQW1Q8N7I0 195 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 WDSUB1Q8N9V3 476 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 OR51T1Q8NGJ9 327 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SSC4DQ8WTU2 575 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SPSB1Q96BD6 273 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SEC22AQ96IW7 307 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 FAM71F1Q96KD3 344 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-223ENST00000544669 CCDC74BQ96LY2 380 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 NPAS1Q99742 590 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 SLC6A15Q9H2J7 730 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 ZFP57Q9NU63 452 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 ATXN7L1Q9ULK2 861 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-223ENST00000544669 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
CPSF7-223ENST00000544669 V9GYS6 101 aa11.51□□□□□ -0.57
CPSF7-223ENST00000544669 WIPF3A6NGB9 483 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 LYL1P12980 280 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 ABOP16442 354 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 SUCLG1P53597 346 aaKnown RBP11.5□□□□□ -0.57
CPSF7-223ENST00000544669 ATP1B3P54709 279 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 CLDN17P56750 224 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 KISS1Q15726 138 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 SGCAQ16586 387 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 MICBQ29980 383 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 ZNF528Q3MIS6 628 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 FAM122CQ6P4D5 195 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 ARMC10Q8N2F6 343 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 SLC30A7Q8NEW0 376 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 MARCH1Q8TCQ1 289 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 SAP25Q8TEE9 199 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 CASTOR1Q8WTX7 329 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 HAS2Q92819 552 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 PIGQQ9BRB3 760 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 CHST5Q9GZS9 411 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 ZNF700Q9H0M5 742 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 C14orf166Q9Y224 244 aaKnown RBP11.5□□□□□ -0.57
CPSF7-223ENST00000544669 FLVCR1Q9Y5Y0 555 aa11.5□□□□□ -0.57
CPSF7-223ENST00000544669 LOC101059948A0A1B0GTJ6 334 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms