RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 GHRLQ9UBU3 117 aa13.99□□□□□ -0.17
SPDEF-202ENST00000544425 PIGLQ9Y2B2 252 aa13.99□□□□□ -0.17
SPDEF-202ENST00000544425 ALG5Q9Y673 324 aa13.99□□□□□ -0.17
SPDEF-202ENST00000544425 MT-ND4P03905 459 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 FAPQ12884 760 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 UNC119Q13432 240 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 UBE2V2Q15819 145 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 FAM189A2Q15884 450 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 AWAT2Q6E213 333 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 COLCA1Q6ZS62 124 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 FGD2Q7Z6J4 655 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 DPPA2Q7Z7J5 298 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 FAM46BQ96A09 425 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 C1QTNF5Q9BXJ0 243 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 PLSCR2Q9NRY7 297 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 MRPL15Q9P015 296 aaKnown RBP13.98□□□□□ -0.17
SPDEF-202ENST00000544425 POU2F3Q9UKI9 436 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 MRPS28Q9Y2Q9 187 aaKnown RBP13.98□□□□□ -0.17
SPDEF-202ENST00000544425 ZNF292O60281 2723 aa13.98□□□□□ -0.17
SPDEF-202ENST00000544425 RAB27BO00194 218 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 SS18L1O75177 396 aaPredicted RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 CHRM2P08172 466 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 CSF1P09603 554 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 ARR3P36575 388 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 FOXG1P55316 489 aaPredicted RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 RIPPLY1Q0D2K3 151 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 FBXW9Q5XUX1 488 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 GLIPR1L1Q6UWM5 242 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 CPEB3Q8NE35 698 aaKnown RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 KCNG3Q8TAE7 436 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 UBASH3BQ8TF42 649 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 C1orf147Q96MC9 270 aaPredicted RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 NUDT15Q9NV35 164 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 CLCF1Q9UBD9 225 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 GMDSO60547 372 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 MELTFP08582 738 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 FAHP16930 419 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 MPGP29372 298 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 FAUP35544 74 aaKnown RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 OR3A2P47893 321 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 CCR6P51684 374 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 KISS1Q15726 138 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 PNLDC1Q8NA58 520 aaKnown RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 OR56B4Q8NH76 319 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 SPSB4Q96A44 273 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 SEH1LQ96EE3 360 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 ST6GAL2Q96JF0 529 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 MYEF2Q9P2K5 600 aaKnown RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 ZNF107Q9UII5 783 aaPredicted RBP13.97□□□□□ -0.17
SPDEF-202ENST00000544425 CNTRLQ7Z7A1 2325 aa13.97□□□□□ -0.17
SPDEF-202ENST00000544425 A0A096LPE4 126 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 A0A1W2PPZ6 126 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 C7orf66A4D0T2 115 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 KLK10O43240 276 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 XRCC2O43543 280 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 LPLP06858 475 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 NAT2P11245 290 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 PSMB1P20618 241 aaKnown RBP13.96□□□□□ -0.17
SPDEF-202ENST00000544425 ZNF169Q14929 603 aaPredicted RBP13.96□□□□□ -0.17
SPDEF-202ENST00000544425 MOGAT2Q3SYC2 334 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 ZNF260Q3ZCT1 412 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 CRIP3Q6Q6R5 217 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 RNF144BQ7Z419 303 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 AQP3Q92482 292 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 AKAP1Q92667 903 aaKnown RBP eCLIP13.96□□□□□ -0.17
SPDEF-202ENST00000544425 SARAFQ96BY9 339 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 SPACA5Q96QH8 159 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 NEK6Q9HC98 313 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 B3GNT2Q9NY97 397 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 PRSS50Q9UI38 385 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 ZNF221Q9UK13 617 aa13.96□□□□□ -0.17
SPDEF-202ENST00000544425 H2AFB2P0C5Z0 115 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 ACKR3P25106 362 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 PTGFRP43088 359 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 OR3A4PP47883 348 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 ACTBP60709 375 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 ACTG1P63261 375 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 PCGF3Q3KNV8 242 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 TBRG1Q3YBR2 411 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 TMEM255AQ5JRV8 349 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 C9orf135Q5VTT2 229 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 TMEM42Q69YG0 159 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 P4HA3Q7Z4N8 544 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 ZNF101Q8IZC7 436 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 OR2AE1Q8NHA4 323 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 SPSB1Q96BD6 273 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 GPER1Q99527 375 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 NCOA6Q14686 2063 aaPredicted RBP13.95□□□□□ -0.18
SPDEF-202ENST00000544425 TRAV6A0A075B6T7 132 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 FAM3AP98173 230 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 GUCA2AQ02747 115 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 TNK1Q13470 666 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 SFRP4Q6FHJ7 346 aaPredicted RBP13.95□□□□□ -0.18
SPDEF-202ENST00000544425 TMEM53Q6P2H8 277 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 LPAR5Q9H1C0 372 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 GHITMQ9H3K2 345 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 DMXL1Q9Y485 3027 aa13.95□□□□□ -0.18
SPDEF-202ENST00000544425 ZFHX2Q9C0A1 2572 aaPredicted RBP13.95□□□□□ -0.18
SPDEF-202ENST00000544425 LOC100509620A0A075B734 347 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms