RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 MBD3L3A6NE82 208 aaPredicted RBP17.22■□□□□ 0.35
COPS7A-218ENST00000543939 MBD3L5A6NJ08 208 aaPredicted RBP17.22■□□□□ 0.35
COPS7A-218ENST00000543939 LYRM1O43325 122 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 STOMP27105 288 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 TMPRSS3P57727 454 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 UBE2V2Q15819 145 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 RNASE12Q5GAN4 147 aaKnown RBP17.22■□□□□ 0.35
COPS7A-218ENST00000543939 VWA1Q6PCB0 445 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 FAM180AQ6UWF9 173 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 Q6ZT83 130 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 SEM1Q6ZVN7 128 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 MBD3L2Q8NHZ7 208 aaPredicted RBP17.22■□□□□ 0.35
COPS7A-218ENST00000543939 NANOS1Q8WY41 292 aaKnown RBP17.22■□□□□ 0.35
COPS7A-218ENST00000543939 SPSB4Q96A44 273 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 AUNIPQ9H7T9 357 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 DIABLOQ9NR28 239 aa17.22■□□□□ 0.35
COPS7A-218ENST00000543939 hCG_38984A0A1B0GV85 526 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 GGT3PA6NGU5 568 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 GABARAPH6UMI1 98 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 XRCC2O43543 280 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 KDM4BO94953 1096 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 BPNT1O95861 308 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 HCKP08631 526 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 RAB6AP20340 208 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 MRPS10P82664 201 aaKnown RBP17.21■□□□□ 0.35
COPS7A-218ENST00000543939 QRFPP83859 136 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF92Q03936 586 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 PLP2Q04941 152 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 FOXF2Q12947 444 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 MZT2BQ6NZ67 158 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF584Q8IVC4 421 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 AKAP1Q92667 903 aaKnown RBP eCLIP17.21■□□□□ 0.35
COPS7A-218ENST00000543939 ZC3HAV1LQ96H79 300 aaKnown RBP17.21■□□□□ 0.35
COPS7A-218ENST00000543939 POM121L2Q96KW2 1035 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 SPACA5Q96QH8 159 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 RBFOX1Q9NWB1 397 aaKnown RBP17.21■□□□□ 0.35
COPS7A-218ENST00000543939 CEP295Q9C0D2 2601 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 C5orf49A4QMS7 147 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 KIR2DL3P43628 341 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 UCNP55089 124 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 FAM3AP98173 230 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 TGFBR3Q03167 851 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 RIPPLY1Q0D2K3 151 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 GSG1Q2KHT4 349 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 RTL6Q6ICC9 239 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 OR10K2Q6IF99 312 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 CELF2-AS1Q8N7Q2 184 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 ZNF75AQ96N20 296 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 ATG5Q9H1Y0 275 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 PLSCR4Q9NRQ2 329 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 RAXQ9Y2V3 346 aa17.21■□□□□ 0.35
COPS7A-218ENST00000543939 WDR1O75083 606 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 FAM157BP0CG42 384 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 GSK3AP49840 483 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 MTFR2Q6P444 385 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 CRIP3Q6Q6R5 217 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 DNM1P46Q6ZS02 220 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 ANGPTL5Q86XS5 388 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 CADM3Q8N126 398 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 PAQR4Q8N4S7 273 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-218ENST00000543939 Q8NA96 180 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 OR52I2Q8NH67 350 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 GCDHQ92947 438 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-218ENST00000543939 MYEF2Q9P2K5 600 aaKnown RBP17.2■□□□□ 0.34
COPS7A-218ENST00000543939 FBLN5Q9UBX5 448 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 RAB22AQ9UL26 194 aa17.2■□□□□ 0.34
COPS7A-218ENST00000543939 PRRC2CQ9Y520 2896 aaKnown RBP17.2■□□□□ 0.34
COPS7A-218ENST00000543939 PTPRQQ9UMZ3 2332 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 INTS1Q8N201 2190 aaKnown RBP17.19■□□□□ 0.34
COPS7A-218ENST00000543939 TNFSF13O75888 250 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 TPOP07202 933 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 VSIG8P0DPA2 414 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 CCL2P13500 99 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 PTGER4P35408 488 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 RANBP1P43487 201 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 SRP9P49458 86 aaKnown RBP17.19■□□□□ 0.34
COPS7A-218ENST00000543939 GPR176Q14439 515 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 OR8B8Q15620 311 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 GABRA6Q16445 453 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 TMEM42Q69YG0 159 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 AWAT2Q6E213 333 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 MDP1Q86V88 176 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 TOMM5Q8N4H5 51 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 FCAMRQ8WWV6 532 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 PHF21AQ96BD5 680 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 ZNF71Q9NQZ8 489 aaPredicted RBP17.19■□□□□ 0.34
COPS7A-218ENST00000543939 MRPS28Q9Y2Q9 187 aaKnown RBP17.19■□□□□ 0.34
COPS7A-218ENST00000543939 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
COPS7A-218ENST00000543939 FAM215AQ9Y5M1 114 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 DMXL2Q8TDJ6 3036 aa17.19■□□□□ 0.34
COPS7A-218ENST00000543939 ORC5O43913 435 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 PTHLHP12272 177 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 COX5AP20674 150 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 CCNOP22674 350 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 GDNFP39905 211 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 OR3A4PP47883 348 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 UNC119Q13432 240 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 KRT74Q7RTS7 529 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 CCDC36Q8IYA8 594 aa17.18■□□□□ 0.34
COPS7A-218ENST00000543939 DUSP18Q8NEJ0 188 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms