RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BPIFB6Q8NFQ5 453 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ITLN1Q8WWA0 313 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 RDH5Q92781 318 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 DVL3Q92997 716 aaPredicted RBP12.8□□□□□ -0.36
CD9-210ENST00000543916 PELI1Q96FA3 418 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ISG20L2Q9H9L3 353 aaKnown RBP12.8□□□□□ -0.36
CD9-210ENST00000543916 MYOZ1Q9NP98 299 aaPredicted RBP12.8□□□□□ -0.36
CD9-210ENST00000543916 GPR84Q9NQS5 396 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 TMEM100Q9NV29 134 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ZNF391Q9UJN7 358 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 CACNG2Q9Y698 323 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 IGHV1-69-2A0A0G2JMI3 117 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 A0A1B0GTI1 187 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 LOC390937A0A1W2PQ73 354 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 IRGMA1A4Y4 181 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 F5H5P2 479 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 CDC14BO60729 498 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 RP2O75695 350 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 TACSTD2P09758 323 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 PIPP12273 146 aaPredicted RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 TNFSF4P23510 183 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 DCKP27707 260 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 RBMXP38159 391 aaKnown RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 DDOSTP39656 456 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 CRYBB2P43320 205 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 MRPS11P82912 194 aaKnown RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 WDR38Q5JTN6 314 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 C6orf141Q5SZD1 244 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 COMMD2Q86X83 199 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 SYS1Q8N2H4 156 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 FAM71F1Q96KD3 344 aaPredicted RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 MEGF10Q96KG7 1140 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 OR2V2Q96R30 315 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 ADAT1Q9BUB4 502 aaKnown RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 EGLN1Q9GZT9 426 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 PPP1R3EQ9H7J1 279 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 TREM2Q9NZC2 230 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 MRPL15Q9P015 296 aaKnown RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 IL19Q9UHD0 177 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 PSORS1C1Q9UIG5 152 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 DIMT1Q9UNQ2 313 aaKnown RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 CR1P17927 2039 aa12.79□□□□□ -0.36
CD9-210ENST00000543916 ZNF469Q96JG9 3925 aaPredicted RBP12.79□□□□□ -0.36
CD9-210ENST00000543916 A0A096LNT2 108 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 RNF223E7ERA6 249 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 H7C1Q1 480 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 SLC1A7O00341 560 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 P2RY10O00398 339 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 ACHEP22303 614 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 GIFP27352 417 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 NANOS3P60323 173 aaKnown RBP12.78□□□□□ -0.36
CD9-210ENST00000543916 ST3GAL4Q11206 333 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 RIN1Q13671 783 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 OR8G1Q15617 311 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 FDX2Q6P4F2 183 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 AHSA2Q719I0 299 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 OR2G2Q8NGZ5 317 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 MRPL48Q96GC5 212 aaKnown RBP12.78□□□□□ -0.36
CD9-210ENST00000543916 TMEM80Q96HE8 168 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 PIMREGQ9BSJ6 248 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 TMUB1Q9BVT8 246 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 CHODLQ9H9P2 273 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 DLL4Q9NR61 685 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 ZNF275Q9NSD4 429 aaPredicted RBP12.78□□□□□ -0.36
CD9-210ENST00000543916 FKBP14Q9NWM8 211 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
CD9-210ENST00000543916 FRRS1LQ9P0K9 344 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 RAB26Q9ULW5 256 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 EXOSC1Q9Y3B2 195 aaKnown RBP12.78□□□□□ -0.36
CD9-210ENST00000543916 RHBDD3Q9Y3P4 386 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
CD9-210ENST00000543916 FLNAP21333 2647 aaKnown RBP12.77□□□□□ -0.36
CD9-210ENST00000543916 HIVEP1P15822 2718 aa12.77□□□□□ -0.36
CD9-210ENST00000543916 CREBBPQ92793 2442 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 IGHV3-64DA0A0J9YX35 117 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 ANKRD30BLA7E2S9 258 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 E9PI62 339 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 NDUFS8O00217 210 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 GMDSO60547 372 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 NR4A2P43354 598 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 MAP2K3P46734 347 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 MAB21L1Q13394 359 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 PLPP7Q8NBV4 271 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 MAPK1IP1LQ8NDC0 245 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 CSNK2A3Q8NEV1 391 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 CNBD2Q96M20 576 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 ZNF184Q99676 751 aaPredicted RBP12.77□□□□□ -0.37
CD9-210ENST00000543916 REG4Q9BYZ8 158 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 BPESC1Q9GZL8 116 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 SLC22A4Q9H015 551 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 PAK1IP1Q9NWT1 392 aaPredicted RBP12.77□□□□□ -0.37
CD9-210ENST00000543916 DCAF16Q9NXF7 216 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 DYSFO75923 2080 aa12.77□□□□□ -0.37
CD9-210ENST00000543916 H3BSH0 61 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 DHRS3O75911 302 aa12.76□□□□□ -0.37
CD9-210ENST00000543916 HTR1AP08908 422 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms