RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 KTI12Q96EK9 354 aaPredicted RBP8.65□□□□□ -1.02
TCF4-208ENST00000543082 TMEM68Q96MH6 324 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 GINS3Q9BRX5 216 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 SMIM3Q9BZL3 60 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 C1orf123Q9NWV4 160 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 OR52A1Q9UKL2 312 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 ZDHHC8Q9ULC8 765 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 ATXN7L1Q9ULK2 861 aaPredicted RBP8.65□□□□□ -1.02
TCF4-208ENST00000543082 SLC17A4Q9Y2C5 497 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 MMP24Q9Y5R2 645 aa8.65□□□□□ -1.02
TCF4-208ENST00000543082 CPAMD8Q8IZJ3 1885 aa8.65□□□□□ -1.03
TCF4-208ENST00000543082 TMEM131Q92545 1883 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 IGLV1-36A0A0B4J1U3 117 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 A0A1B0GWJ7 208 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 OR5H15A6NDH6 313 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 OR5H1A6NKK0 313 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 TMEM14DPA8MWL7 114 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 MKRN2OSH3BPM6 223 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 GMFGO60234 142 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BKO60814 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 PTBP3O95758 552 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BJP06899 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 RPS2P15880 293 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 PI3P19957 117 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BOP23527 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 LMO1P25800 156 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BBP33778 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 RBMXP38159 391 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BDP58876 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BCP62807 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 MESP2Q0VG99 397 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST2H2BEQ16778 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.64□□□□□ -1.03
TCF4-208ENST00000543082 KHDC3LQ587J8 217 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 OTPQ5XKR4 325 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 FIGLAQ6QHK4 219 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SPNS3Q6ZMD2 512 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 DEFB128Q7Z7B8 93 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 BCORP1Q8N888 145 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 FLVCR1-AS1Q8TAF5 88 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 FNDC9Q8TBE3 224 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 METTL21AQ8WXB1 218 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 EMG1Q92979 244 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BHQ93079 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 NTNG2Q96CW9 530 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SPACA7Q96KW9 195 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 FOXN4Q96NZ1 517 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 NEU1Q99519 415 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BNQ99877 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H2BMQ99879 126 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 ZFYVE21Q9BQ24 234 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 OR11A1Q9GZK7 315 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 TGIF2Q9GZN2 237 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 G6PC2Q9NQR9 355 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SLC2A4RGQ9NR83 387 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 TUBD1Q9UJT1 453 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SLC5A6Q9Y289 635 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 B3GALT5Q9Y2C3 310 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 PUS1Q9Y606 427 aaKnown RBP eCLIP8.64□□□□□ -1.03
TCF4-208ENST00000543082 LTBP2Q14767 1821 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 K7EQS6 105 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 LMX1BO60663 402 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SLC16A7O60669 478 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 PRH1P02810 166 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 PPM1AP35813 382 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 P2RY1P47900 373 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 RPL27P61353 136 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 LSM6P62312 80 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 ZNF117Q03924 483 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 RELQ04864 619 aaPredicted RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 ZP2Q05996 745 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 UBE2V2Q15819 145 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SHISA5Q8N114 240 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 CCDC54Q8NEL0 328 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 OR2I1PQ8NGU4 316 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 OR13G1Q8NGZ3 307 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 M1APQ8TC57 530 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 GPBAR1Q8TDU6 330 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 TAAR8Q969N4 342 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 C5orf34Q96MH7 638 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 DUSP15Q9H1R2 295 aaPredicted RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 NELFAQ9H3P2 528 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 SIRT7Q9NRC8 400 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 VSX1Q9NZR4 365 aaPredicted RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 C14orf166Q9Y224 244 aaKnown RBP8.64□□□□□ -1.03
TCF4-208ENST00000543082 OSGIN2Q9Y236 505 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 FREM3P0C091 2139 aa8.64□□□□□ -1.03
TCF4-208ENST00000543082 H0YGG7 62 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 IFNA21P01568 189 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 HIST1H1DP16402 221 aaKnown RBP8.63□□□□□ -1.03
TCF4-208ENST00000543082 AMY2BP19961 511 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 GNALP38405 381 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 CEACAM6P40199 344 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 OR3A2P47893 321 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 TM4SF4P48230 202 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 TAS2R46P59540 309 aa8.63□□□□□ -1.03
TCF4-208ENST00000543082 ARF3P61204 181 aaPredicted RBP8.63□□□□□ -1.03
TCF4-208ENST00000543082 SQSTM1Q13501 440 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms