RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 PNPP00491 289 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 LYNP07948 512 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 H2BFMP0C1H6 154 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SLC2A1P11166 492 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 IRF2P14316 349 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 CA6P23280 308 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 GATA3P23771 443 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 RBMXP38159 391 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 DDOSTP39656 456 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OPRL1P41146 370 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 CD200P41217 278 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 GATA4P43694 442 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ALDH3A2P51648 485 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 AQP4P55087 323 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 RPS7P62081 194 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 MZT1Q08AG7 82 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 HNRNPA0Q13151 305 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 MAB21L1Q13394 359 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PTGES3Q15185 160 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ZMYND11Q15326 602 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 TIGD6Q17RP2 521 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 KLBQ86Z14 1044 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 C1orf87Q8N0U7 546 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 MUC20Q8N307 709 aaPredicted RBP8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 GALNT4Q8N4A0 578 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 TEX29Q8N6K0 151 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SPERTQ8NA61 448 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 BBS1Q8NFJ9 593 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OR4M2Q8NGB6 313 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OR52H1Q8NGJ2 320 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OR11L1Q8NGX0 322 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OTOSQ8NHW6 89 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SPATA3Q8NHX4 192 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SPSB4Q96A44 273 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 AMELYQ99218 206 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SLC29A1Q99808 456 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OR10A2Q9H208 303 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 OPA3Q9H6K4 179 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 KRT84Q9NSB2 600 aa8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 MRPL15Q9P015 296 aaKnown RBP8.18□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PPIAL4EA0A075B759 164 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PPIAL4CA0A0B4J2A2 164 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 IGHV3-64DA0A0J9YX35 117 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PPIAL4DF5H284 164 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SELENOFO60613 162 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 MITFO75030 526 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ALPLP05186 524 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 WNT2P09544 360 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PPIAL4FP0DN26 164 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ALOX5APP20292 161 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SLC2A5P22732 501 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ANOS1P23352 680 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 CFL1P23528 166 aaKnown RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ZFP36P26651 326 aaKnown RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ZNF121P58317 390 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 LCN2P80188 198 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 FAM3AP98173 230 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SCGB2A2Q13296 93 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 APOFQ13790 326 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 DCAF12L2Q5VW00 463 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 LIPNQ5VXI9 398 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 KDM4DQ6B0I6 523 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 FAM57BQ71RH2 274 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SLC16A9Q7RTY1 509 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PRSS45Q7RTY3 260 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 RFLNBQ8N5W9 214 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 Q8TCH9 128 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 REEP6Q96HR9 211 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PGAM5Q96HS1 289 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 RDH12Q96NR8 316 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PRRG3Q9BZD7 231 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 YIPF3Q9GZM5 350 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 C7orf69Q9H7B7 122 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 NIPAL2Q9H841 368 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 BRD7Q9NPI1 651 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SMPD3Q9NY59 655 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 DNAJC27Q9NZQ0 273 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 H2AFY2Q9P0M6 372 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 MIOXQ9UGB7 285 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 LAMP5Q9UJQ1 280 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PPIAL4AQ9Y536 164 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ORC6Q9Y5N6 252 aa8.17□□□□□ -1.1
TNFRSF1A-214ENST00000543048 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ACOD1A6NK06 481 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ZAR1LA6NP61 321 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ANKRD30BLA7E2S9 258 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 F5H0A9 414 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PRKYO43930 277 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 ZNF205O95201 554 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PTBP3O95758 552 aaKnown RBP8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 NAA10P41227 235 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 GSK3AP49840 483 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 HCCSP53701 268 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 EFNB1P98172 346 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 LCN1P1Q5VSP4 162 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 PRAMEF6Q5VXH4 476 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 SLX4IPQ5VYV7 408 aa8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 KCTD18Q6PI47 426 aaPredicted RBP8.16□□□□□ -1.1
TNFRSF1A-214ENST00000543048 DEGS2Q6QHC5 323 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms