RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ZNF532Q9HCE3 1301 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MAST4O15021 2626 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MYH3P11055 1940 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 IGHV1OR15-1A0A075B7D0 117 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 IGHV3OR16-13A0A075B7E8 117 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 IGHV3OR16-10A0A075B7F0 116 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 A0A1W2PRF3 423 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 A0A1W2PRM7 423 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TSPAN11A1L157 253 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF98A6NK75 572 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LYRM9A8MSI8 78 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 EPM2AB3EWF7 344 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 SHISA9B4DS77 424 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TMX2-CTNND1H3BSU7 103 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 hCG_2039718K7EN88 272 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 K7N7A8 449 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LAD1O00515 517 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TOR1AO14656 332 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 EIF3GO75821 320 aaKnown RBP eCLIP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 DCTN3O75935 186 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CIAO1O76071 339 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LSM8O95777 96 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 IFNA16P05015 189 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PRPS2P11908 318 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 GFAPP14136 432 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 IVDP26440 423 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 AQP1P29972 269 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TALDO1P37837 337 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 RFC3P40938 356 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PPP1R2P41236 205 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 KIR2DS4P43632 304 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 SLC26A2P50443 739 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ATP12AP54707 1039 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 UGT2B15P54855 530 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 RAB14P61106 215 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 SP4Q02446 784 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF92Q03936 586 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ACVR1Q04771 509 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC63Q05C16 580 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CD47Q08722 323 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 SIGLEC14Q08ET2 396 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PDIA2Q13087 525 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 BAMBIQ13145 260 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MED21Q13503 144 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 COTL1Q14019 142 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 POU6F1Q14863 301 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PSG3Q16557 428 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC36Q1X8D7 754 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PTPN20Q4JDL3 420 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LPCAT4Q643R3 524 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CLEC6AQ6EIG7 209 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ADNP2Q6IQ32 1131 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PPP1R2P3Q6NXS1 205 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PRMT9Q6P2P2 845 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TRMT10CQ7L0Y3 403 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ARPINQ7Z6K5 226 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 NR2C2APQ86WQ0 139 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 RALGPS2Q86X27 583 aaPredicted RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CADM2Q8N3J6 435 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 HSD17B11Q8NBQ5 300 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 OR10H4Q8NGA5 316 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 FAM172AQ8WUF8 416 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 NDRG1Q92597 394 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 FGF14Q92915 247 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MRGPRFQ96AM1 343 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 FGGYQ96C11 551 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CCDC124Q96CT7 223 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MED8Q96G25 268 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 RNF170Q96K19 258 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 FOXN4Q96NZ1 517 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 DUX3Q96PT4 197 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CYTH2Q99418 400 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 OPRPNQ99935 248 aaPredicted RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC61Q9BV99 259 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MAP1LC3CQ9BXW4 147 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF717Q9BY31 904 aaPredicted RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MROQ9BYG7 248 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 BARHL1Q9BZE3 327 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 NXF3Q9H4D5 531 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TMEM38AQ9H6F2 299 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC19Q9H756 370 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ISG20L2Q9H9L3 353 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 PATZ1Q9HBE1 687 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MRPL40Q9NQ50 206 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF275Q9NSD4 429 aaPredicted RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 EXD2Q9NVH0 621 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MCUBQ9NWR8 336 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 CLN6Q9NWW5 311 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TAS2R1Q9NYW7 299 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF282Q9UDV7 671 aaPredicted RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 RSL24D1Q9UHA3 163 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ENOPH1Q9UHY7 261 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 TRMT112Q9UI30 125 aaKnown RBP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ERGIC3Q9Y282 383 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 A0A1B0GUL6 1792 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 MAST2Q6P0Q8 1798 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ARAP2Q8WZ64 1704 aa3.04□□□□□ -1.92
SFSWAP-211ENST00000542813 ACACBO00763 2458 aa3.03□□□□□ -1.92
SFSWAP-211ENST00000542813 PSME4Q14997 1843 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms