RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 MMP7P09237 267 aaPredicted RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 ZNF735P0CB33 412 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 RCVRNP35243 200 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 FAUP35544 74 aaKnown RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 ALDH3B1P43353 468 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 GSK3AP49840 483 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 PSG4Q00888 419 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 SCRN3Q0VDG4 424 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 SFRP5Q5T4F7 317 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 STEAP1BQ6NZ63 245 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 TMEM104Q8NE00 496 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 SEC22CQ9BRL7 303 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 OR2H1Q9GZK4 316 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 CHST5Q9GZS9 411 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 METTL21EPA6NDL7 271 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 FABP7O15540 132 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 NAT2P11245 290 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 FAHP16930 419 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 ANXA7P20073 488 aaKnown RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 SLC6A9P48067 706 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 TCF15Q12870 199 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 UBE2V2Q15819 145 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 STK11Q15831 433 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 NRN1LQ496H8 165 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 METTL11BQ5VVY1 283 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 GLIPR1L1Q6UWM5 242 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 OR52H1Q8NGJ2 320 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 DVL3Q92997 716 aaPredicted RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 C10orf35Q96D05 121 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 RNF122Q9H9V4 155 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 ZMAT3Q9HA38 289 aaKnown RBP12.38□□□□□ -0.43
LDB3-207ENST00000542786 ACKR4Q9NPB9 350 aa12.38□□□□□ -0.43
LDB3-207ENST00000542786 ARGFXA6NJG6 315 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 G3V3Q6 166 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 RPL36A-HNRNPH2H7BZ11 118 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 SSX5O60225 188 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 ANXA3P12429 323 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 ACKR3P25106 362 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 TAS2R19P59542 299 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 SRYQ05066 204 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 RNFT1Q5M7Z0 435 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 AKR7LQ8NHP1 331 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 PP6455Q8WZ26 134 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 NICN1Q9BSH3 213 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 OR10A2Q9H208 303 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 ANAPC10Q9UM13 185 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 TIMM10BQ9Y5J6 103 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 LIPGQ9Y5X9 500 aa12.37□□□□□ -0.43
LDB3-207ENST00000542786 DHRS7CA6NNS2 312 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 ZNF724A8MTY0 619 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 SNRPGP15A8MWD9 76 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 CDC14BO60729 498 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 SCGNO76038 276 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 PLGLB1Q02325 96 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 SRSF6Q13247 344 aaKnown RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 CDNFQ49AH0 187 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 ZNF626Q68DY1 528 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 IGF2-ASQ6U949 168 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 ZNF782Q6ZMW2 699 aaPredicted RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 FJX1Q86VR8 437 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 C9orf62Q8N4C0 152 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 MEIOBQ8N635 442 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 OR10R2Q8NGX6 335 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 HAS2Q92819 552 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 PRRX2Q99811 253 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 TMEM246Q9BRR3 403 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 ZNF552Q9H707 407 aaPredicted RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 SLC7A10Q9NS82 523 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 B3GNT2Q9NY97 397 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 NOSIPQ9Y314 301 aaKnown RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 RTTNQ86VV8 2226 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 FCER2P06734 321 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 WT1P19544 449 aaPredicted RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 MPZP25189 248 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 PPIAP62937 165 aaKnown RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 C1QL2Q7Z5L3 287 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 VASH2Q86V25 355 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 FAM89BQ8N5H3 189 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 SPICQ8N5J4 248 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 KCNG3Q8TAE7 436 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 FNDC9Q8TBE3 224 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 CYYR1Q96J86 154 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 GINS4Q9BRT9 223 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 TINAGL1Q9GZM7 467 aaPredicted RBP12.36□□□□□ -0.43
LDB3-207ENST00000542786 EXO5Q9H790 373 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 DLL4Q9NR61 685 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 KCNK7Q9Y2U2 307 aa12.36□□□□□ -0.43
LDB3-207ENST00000542786 A0A1W2PP11 408 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms