RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 OR10A5Q9H207 317 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MEPEQ9NQ76 525 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 HINT3Q9NQE9 182 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 GPR173Q9NS66 373 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CUTCQ9NTM9 273 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FBXL4Q9UKA2 621 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 GOLGA4Q13439 2230 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 COL5A1P20908 1838 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 IGKV3D-11A0A0A0MRZ8 115 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NAP1L6A6NFF2 107 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ANKRD61A6NGH8 418 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NKX6-3A6NJ46 265 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SNRPGP15A8MWD9 76 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM150CB9EJG8 249 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 GSTZ1O43708 216 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 DUX1O43812 170 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 IFNA17P01571 189 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MT-ND5P03915 603 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FOLR1P15328 257 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 RPA2P15927 270 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 HLA-GP17693 338 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 HTR1FP30939 366 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 RGS8P57771 180 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 OR12D2P58182 307 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 TGIF1Q15583 401 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 DECR1Q16698 335 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ATP6V1FQ16864 119 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 EIPR1Q53HC9 387 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM69Q5SWH9 247 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MRPL2Q5T653 305 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 PRAMEF17Q5VTA0 474 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MRGPREQ86SM8 312 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM56Q96MV1 263 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MCHR1Q99705 422 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 DDA1Q9BW61 102 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ABRACLQ9P1F3 81 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC7A11Q9UPY5 501 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MRPS33Q9Y291 106 aaKnown RBP7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FAM96BQ9Y3D0 163 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM56-RWDD3S4R434 201 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MUC3AQ02505 3323 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 TRDCB7Z8K6 153 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NPIPB9F8W1W9 429 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CDC14BO60729 498 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NDUFB6O95139 128 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ACTL6AO96019 429 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 IGHA1P01876 353 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CT45A8P0DMV1 189 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CT45A9P0DMV2 189 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SERPINA2P20848 420 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 AGAP20933 346 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CTSSP25774 331 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ABCD3P28288 659 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 HCCSP53701 268 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 PTTG1IPP53801 180 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ST3GAL3Q11203 375 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 AMZ1Q400G9 498 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CT45A2Q5DJT8 189 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 UQCC3Q6UW78 93 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 KCTD9Q7L273 389 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 PLXDC1Q8IUK5 500 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 BEST3Q8N1M1 668 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 DNAAF1Q8NEP3 725 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NUBPLQ8TB37 319 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SAP25Q8TEE9 199 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SMPDL3BQ92485 455 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ERGIC1Q969X5 290 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC41A3Q96GZ6 507 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 NUDT22Q9BRQ3 303 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF426Q9BUY5 554 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 CHST5Q9GZS9 411 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 SLC25A18Q9H1K4 315 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 FSCN3Q9NQT6 498 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 KLHL28Q9NXS3 571 aa7.14□□□□□ -1.27
PDLIM5-221ENST00000542407 MEIS3P1A6NDR6 274 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 GABARAPH6UMI1 98 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 ADAM10O14672 748 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 PTH2RP49190 550 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 UBE2NLQ5JXB2 153 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 ELFN2Q5R3F8 820 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 NCR3LG1Q68D85 454 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 SSX7Q7RTT5 188 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 TMED4Q7Z7H5 227 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 GTPBP8Q8N3Z3 284 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 PTPMT1Q8WUK0 201 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 TMEM255BQ8WV15 326 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 ZNF501Q96CX3 271 aaPredicted RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 SEC22AQ96IW7 307 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 DGAT2Q96PD7 388 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 EXOGQ9Y2C4 368 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 NME2P1O60361 137 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 DXOO77932 396 aaKnown RBP7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 PMP2P02689 132 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 IL5P05113 134 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 CD2P06729 351 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 GKN3PP0CG01 181 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 ERVS71-1P61550 626 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 BTNL3Q6UXE8 466 aa7.13□□□□□ -1.27
PDLIM5-221ENST00000542407 TTLL10Q6ZVT0 673 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms