RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	GLYATL1P3	A0A0U1RQE8	302 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	TSPAN11	A1L157	253 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OR5B21	A6NL26	309 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513		H3BMQ9	156 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513		K7EQS6	105 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513		M0R036	132 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	SLC1A7	O00341	560 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	TCAP	O15273	167 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ATP6V0E1	O15342	81 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	EIF1B	O60739	113 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ALOX12B	O75342	701 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	CLDN14	O95500	239 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ORM1	P02763	201 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	FGF1	P05230	155 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	C2	P06681	752 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	RNH1	P13489	461 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ZP3	P21754	424 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	KDELR1	P24390	212 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	IL12A	P29459	219 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	C21orf33	P30042	268 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	FGF9	P31371	208 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	DDOST	P39656	456 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	EIF1	P41567	113 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	HNRNPA3	P51991	378 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	FUT6	P51993	359 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	UGT2B15	P54855	530 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	CDH11	P55287	796 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	DLX5	P56178	289 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OR2B8P	P59922	312 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	RPL8	P62917	257 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	RPL24	P83731	157 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	HPCA	P84074	193 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	VLDLR	P98155	873 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF45	Q02386	682 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	TNFRSF9	Q07011	255 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	STX4	Q12846	297 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	PDIA2	Q13087	525 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OR5I1	Q13606	314 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ACTL10	Q5JWF8	245 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ACER2	Q5QJU3	275 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	WASHC2D	Q5SRD0	308 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	FNBP1L	Q5T0N5	605 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OR8G2P	Q6IF36	304 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OGFOD2	Q6N063	350 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	RWDD4	Q6NW29	188 aa	Known RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	CEACAM19	Q7Z692	300 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	NT5DC3	Q86UY8	548 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	DHFR2	Q86XF0	187 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF547	Q8IVP9	402 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ZFP82	Q8N141	532 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	UMODL1-AS1	Q8N2C9	162 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	MDS2	Q8NDY4	140 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	CCDC54	Q8NEL0	328 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OR1K1	Q8NGR3	316 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OR1L3	Q8NH93	324 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	IL1F10	Q8WWZ1	152 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	HGD	Q93099	445 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	CLDN23	Q96B33	292 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	TAMM41	Q96BW9	452 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	YIPF6	Q96EC8	236 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	URB1-AS1	Q96HZ7	61 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	NOL4L	Q96MY1	436 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	OXGR1	Q96P68	337 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	NIPSNAP1	Q9BPW8	284 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	KLHDC3	Q9BQ90	382 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	SLC25A33	Q9BSK2	321 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	KIFC1	Q9BW19	673 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	SSBP3	Q9BWW4	388 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	SLC19A3	Q9BZV2	496 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	MFSD1	Q9H3U5	465 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	PLGRKT	Q9HBL7	147 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	NLE1	Q9NVX2	485 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ZNF224	Q9NZL3	707 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	THAP10	Q9P2Z0	257 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	BTNL2	Q9UIR0	455 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	GUCA1B	Q9UMX6	200 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	COPS3	Q9UNS2	423 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	NDUFAF1	Q9Y375	327 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	POLR3H	Q9Y535	204 aa	Predicted RBP	4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	CACNA1E	Q15878	2313 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	RALGAPA1	Q6GYQ0	2036 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	TRPM6	Q9BX84	2022 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	DOCK9	Q9BZ29	2069 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	ABCA7	Q8IZY2	2146 aa		4.63	□□□□□ -1.67
DDB1-219	ENST00000541513	THADA	Q6YHU6	1953 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	WDFY4	Q6ZS81	3184 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	VPS13A	Q96RL7	3174 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	hCG_1818297	A0A087WSY0	165 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TRBV7-9	A0A0J9YWB2	115 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	PQLC2L	A1A4F0	135 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	METTL15	A6NJ78	407 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	RFPL4A	A6NLU0	287 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	RFPL4AL1	F8VTS6	287 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513		G3V3Y1	287 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	GFY	I3L273	518 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513		K7EN84	100 aa		4.62	□□□□□ -1.67
DDB1-219	ENST00000541513	TXNDC9	O14530	226 aa		4.62	□□□□□ -1.67

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