RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 CD96P40200 585 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 PGFP49763 221 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 EMDP50402 254 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 SUB1P53999 127 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 KRTDAPP60985 99 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 IFITM3Q01628 133 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF79Q15937 498 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 RPL7L1Q6DKI1 246 aaKnown RBP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 MS4A4AQ96JQ5 239 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 SLC35E1Q96K37 410 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 C4orf45Q96LM5 186 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 OPN4Q9UHM6 478 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 TIMM10BQ9Y5J6 103 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 CHEK1O14757 476 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 Q3ZCU0 254 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 DMKNQ6E0U4 476 aaPredicted RBP13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 NMES1Q9C002 83 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 HCSTQ9UBK5 93 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 LPAR3Q9UBY5 353 aa13.51□□□□□ -0.25
SMARCA4-207ENST00000541122 OPN1MWP04001 364 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 OPN1MW2P0DN77 364 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 OPN1MW3P0DN78 364 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 ABCD3P28288 659 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 OPRM1P35372 400 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 PIK3IP1Q96FE7 263 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 SSC5DA1L4H1 1573 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 IGLV3-16A0A075B6K0 115 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 H0Y8G0 127 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 NRASP01111 189 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 SHBQ15464 509 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 PRAMEF20Q5VT98 475 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 TRBV5-3A0A0A0MS03 114 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A1B0GX78 115 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 ZFPL1O95159 310 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 CST2P09228 141 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 CXCL3P19876 107 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 PET117Q6UWS5 81 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 RABEPKQ7Z6M1 372 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 SPNS2Q8IVW8 549 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 FBXL6Q8N531 539 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 TCTEX1D1Q8N7M0 179 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 ARSGQ96EG1 525 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 TIMM8AO60220 97 aaPredicted RBP13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 IGHA1P01876 353 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 PTHLHP12272 177 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 B4GALNT1Q00973 533 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 LTC4SQ16873 150 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 OR2A2Q6IF42 318 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 BADQ92934 168 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 CA14Q9ULX7 337 aa13.5□□□□□ -0.25
SMARCA4-207ENST00000541122 POM121BA6NF01 834 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 LY86O95711 162 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 GLI4P10075 376 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 SELEP16581 610 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 DEFB103AP81534 67 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 HTRA3P83110 453 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 PTP4A1Q93096 173 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 OXGR1Q96P68 337 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 EMC6Q9BV81 110 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 BCORQ6W2J9 1755 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A087X0M5 115 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 A0A1B0GX30 115 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 XKRY2A2RUG3 117 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 B4DEV8 164 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF764Q96H86 408 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 SLC17A4Q9Y2C5 497 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 H0YIG0 161 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 MPGP29372 298 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 SUMO3P55854 103 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 ZNF345Q14585 488 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 TRILQ7L0X0 811 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 ABI3BPQ7Z7G0 1075 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 OR52N4Q8NGI2 321 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 LRP12Q9Y561 859 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 ARAP2Q8WZ64 1704 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 HIST1H1DP16402 221 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 RPS27P42677 84 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 PNLIPRP2P54317 469 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 RAB32Q13637 225 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 INSL4Q14641 139 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 C9orf135Q5VTT2 229 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 OR2A1Q8NGT9 310 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 SPACA5Q96QH8 159 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 MIOXQ9UGB7 285 aa13.49□□□□□ -0.25
SMARCA4-207ENST00000541122 FRG2CA6NGY1 282 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 ALOX12BO75342 701 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 GALR1P47211 349 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 PPIAP62937 165 aaKnown RBP13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 AWAT1Q58HT5 328 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 MORN4Q8NDC4 146 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 FGF22Q9HCT0 170 aa13.48□□□□□ -0.25
SMARCA4-207ENST00000541122 OGG1O15527 345 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms