RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 LPCAT3Q6P1A2 487 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 CCDC36Q8IYA8 594 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 GPER1Q99527 375 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 NAA11Q9BSU3 229 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 RSRP1Q9BUV0 290 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 MRPS28Q9Y2Q9 187 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 TPPPO94811 219 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 SCGB1D2O95969 90 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 GUSBP08236 651 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 POU2F2P09086 479 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 PPT1P50897 306 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR1D5P58170 312 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 HSF1Q00613 529 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 FOXF1Q12946 379 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 CCDC157Q569K6 752 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 BRICD5Q6PL45 260 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 BATF2Q8N1L9 274 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 TERB2Q8NHR7 220 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 RNF141Q8WVD5 230 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 SECTM1Q8WVN6 248 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAB3CQ96E17 227 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 C14orf79Q96F83 325 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 PHYHIPLQ96FC7 376 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 RTBDNQ9BSG5 229 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLCO5A1Q9H2Y9 848 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 GPR84Q9NQS5 396 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC2A8Q9NY64 477 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 ASH2LQ9UBL3 628 aa9.17□□□□□ -0.94
CDC42SE1-207ENST00000540998 RAB19A4D1S5 217 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 PMS2P1A4D2B8 440 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 F8VVB4 439 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 F8VWA3 439 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 MBTPS2O43462 519 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 EFNA2O43921 213 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ACAA1P09110 424 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR5AS1Q8N127 324 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC22A24Q8N4F4 322 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZDHHC22Q8N966 263 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC30A7Q8NEW0 376 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR1L3Q8NH93 324 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 GLYATL2Q8WU03 294 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 SFT2D1Q8WV19 159 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 VN1R1Q9GZP7 353 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ELL3Q9HB65 397 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 MYOZ1Q9NP98 299 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 LPAR3Q9UBY5 353 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 AMDHD2Q9Y303 409 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 FLVCR1Q9Y5Y0 555 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF407Q9C0G0 2248 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ADAM10O14672 748 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 H2AFB1P0C5Y9 115 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 FOLR1P15328 257 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF20P17024 532 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 AMY2BP19961 511 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 CRABP1P29762 137 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC6A8P48029 635 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 SP6Q3SY56 376 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 DHRS7BQ6IAN0 325 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 DHRS11Q6UWP2 260 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 SLC25A43Q8WUT9 341 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 DYRK2Q92630 601 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 C1orf147Q96MC9 270 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 KCNK17Q96T54 332 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 NKX2-4Q9H2Z4 354 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 RCC2Q9P258 522 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 EDARQ9UNE0 448 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 LHFPL6Q9Y693 200 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 TRBV23-1A0A0A0MS06 115 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 IFI6P09912 130 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF17P17021 662 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 CBX5P45973 191 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 HOXA1P49639 335 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 MEOX2P50222 304 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF121P58317 390 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 B2MP61769 119 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 PJVKQ0ZLH3 352 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 TSPO2Q5TGU0 170 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM244Q5VVB8 128 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 FAM57BQ71RH2 274 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 GRINAQ7Z429 371 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF248Q8NDW4 579 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR10H5Q8NGA6 315 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR5T2Q8NGG2 359 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 OR8B12Q8NGG6 310 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 RNF133Q8WVZ7 376 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 KLHDC7BQ96G42 594 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 IP6K3Q96PC2 410 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZFP57Q9NU63 452 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 TMEM100Q9NV29 134 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNF701Q9NV72 531 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 EHFQ9NZC4 300 aa9.16□□□□□ -0.94
CDC42SE1-207ENST00000540998 IGKV3D-11A0A0A0MRZ8 115 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 IGKV1-9A0A0C4DH69 117 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 ZNHIT1O43257 154 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 NME2P1O60361 137 aa9.15□□□□□ -0.94
CDC42SE1-207ENST00000540998 CDC14BO60729 498 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms