RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 TOXO94900 526 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 BTCP35070 178 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 MAP2K3P46734 347 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 RAB1AP62820 205 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 GUCA2AQ02747 115 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 ANKRD16Q6P6B7 361 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 NKAIN3Q8N8D7 197 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 CNEP1R1Q8N9A8 125 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 C19orf18Q8NEA5 215 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 SMIM4Q8WVI0 70 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 S100A16Q96FQ6 103 aaKnown RBP10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 C1orf147Q96MC9 270 aaPredicted RBP10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 GPR137Q96N19 417 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 MRI1Q9BV20 369 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 C1QTNF5Q9BXJ0 243 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 GPR173Q9NS66 373 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 TBCCD1Q9NVR7 557 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 ELF5Q9UKW6 265 aaPredicted RBP10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 FAM215AQ9Y5M1 114 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 ATMQ13315 3056 aa10.65□□□□□ -0.71
AP003559.1-201ENST00000540906 A0A0B4J293 547 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 hCG_38984A0A1B0GV85 526 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 GSTZ1O43708 216 aaPredicted RBP10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 PFDN1O60925 122 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 LYZL6O75951 148 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 APOC1P02654 83 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 CELA3BP08861 270 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 ARSBP15848 533 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 CCNOP22674 350 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 THBS4P35443 961 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 FAM3AP98173 230 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 TBRG1Q3YBR2 411 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 TMEM69Q5SWH9 247 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 RPUSD3Q6P087 351 aaKnown RBP10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 C3P1Q6ZMU1 363 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 COLCA1Q6ZS62 124 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 C1QL2Q7Z5L3 287 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 MDP1Q86V88 176 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 NAXEQ8NCW5 288 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 OR52H1Q8NGJ2 320 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 OR5D18Q8NGL1 313 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 RAB40AQ8WXH6 277 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 WNT2BQ93097 391 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 PIGTQ969N2 578 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 FAM46BQ96A09 425 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 POM121L2Q96KW2 1035 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 PLEKHA1Q9HB21 404 aa10.64□□□□□ -0.71
AP003559.1-201ENST00000540906 C5orf49A4QMS7 147 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 GGT3PA6NGU5 568 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 CTDSPLO15194 276 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ORC5O43913 435 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 RAD51DO75771 328 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 TNFSF13O75888 250 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 NGFP01138 241 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 VSIG8P0DPA2 414 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ZNF93P35789 620 aaPredicted RBP10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 WNT5AP41221 380 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 SCAND1P57086 179 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 KLF9Q13886 244 aaPredicted RBP10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 PRR30Q53SZ7 412 aaPredicted RBP10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 TMEM255AQ5JRV8 349 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 NSUN5P2Q63ZY6 315 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ZNF324BQ6AW86 544 aaPredicted RBP10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 BAIAP2L2Q6UXY1 529 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 RNF170Q96K19 258 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 SORCS2Q96PQ0 1159 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 NEURL2Q9BR09 285 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 CHST5Q9GZS9 411 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 SLC22A4Q9H015 551 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ATG5Q9H1Y0 275 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 GLRX2Q9NS18 164 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 KLK11Q9UBX7 282 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 TRAV18A0A075B6X5 111 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 AHRRA9YTQ3 701 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ZZEF1O43149 2961 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 RRP8O43159 456 aaKnown RBP10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 XRCC3O43542 346 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 HCKP08631 526 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 FAM87AP0C7U9 286 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 PRF1P14222 555 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 GABRA1P14867 456 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 STOMP27105 288 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 GDNFP39905 211 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 MNDAP41218 407 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 GSK3AP49840 483 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 PMPCAQ10713 525 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 PGAP1Q75T13 922 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ANGPTL5Q86XS5 388 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 ITFG2Q969R8 447 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 CMBLQ96DG6 245 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 OPN3Q9H1Y3 402 aaPredicted RBP10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 NLKQ9UBE8 527 aa10.63□□□□□ -0.71
AP003559.1-201ENST00000540906 PRR14LQ5THK1 2151 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 INTS1Q8N201 2190 aaKnown RBP10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 IGKV1-27A0A075B6S5 117 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 A0A0A6YYD4 124 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 OR14I1A6ND48 311 aa10.62□□□□□ -0.71
AP003559.1-201ENST00000540906 MEIS3P1A6NDR6 274 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms