RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 IKZF2Q9UKS7 526 aa14.2□□□□□ -0.14
CD9-209ENST00000540891 TMEM269A0A1B0GVZ9 245 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 ZNF670-ZNF695F2Z2N8 137 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 IFNL4K9M1U5 179 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 PHYHO14832 338 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 ENTPD6O75354 484 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 ZNF205O95201 554 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 PNPP00491 289 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 IGLV3-1P01715 115 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 GABRB1P18505 474 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 RIDAP52758 137 aaKnown RBP14.19□□□□□ -0.14
CD9-209ENST00000540891 SNRPGP62308 76 aaKnown RBP14.19□□□□□ -0.14
CD9-209ENST00000540891 HOXA4Q00056 320 aaPredicted RBP14.19□□□□□ -0.14
CD9-209ENST00000540891 EGR3Q06889 387 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 TMED1Q13445 227 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 CR1LQ2VPA4 569 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 TMEM155Q4W5P6 130 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 SLC25A30Q5SVS4 291 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 FAM201AQ5SY85 155 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 FAM120AOSQ5T036 256 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 PLEKHG7Q6ZR37 379 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 WDR86Q86TI4 376 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 Q8TCH9 128 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 STMN2Q93045 179 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 ERGIC1Q969X5 290 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 PPP1R14AQ96A00 147 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 RAB39BQ96DA2 213 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 TBX5Q99593 518 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 IMPAD1Q9NX62 359 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 UBAP1Q9NZ09 502 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 AASSQ9UDR5 926 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 NOP16Q9Y3C1 178 aaKnown RBP14.19□□□□□ -0.14
CD9-209ENST00000540891 RHBDD3Q9Y3P4 386 aa14.19□□□□□ -0.14
CD9-209ENST00000540891 A0A1W2PQL4 384 aaPredicted RBP14.18□□□□□ -0.14
CD9-209ENST00000540891 ACOD1A6NK06 481 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 ANKRD30BLA7E2S9 258 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 DLGAP1O14490 977 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 FAM20BO75063 409 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 POU4F2Q12837 409 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 ZSCAN26Q16670 478 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 ZNF684Q5T5D7 378 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 GLCCI1Q86VQ1 547 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 KLBQ86Z14 1044 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 TMEM186Q96B77 213 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 PBOV1Q9GZY1 135 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 SHARPINQ9H0F6 387 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 UFSP2Q9NUQ7 469 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 HIF1ANQ9NWT6 349 aa14.18□□□□□ -0.14
CD9-209ENST00000540891 NUFIP1Q9UHK0 495 aaKnown RBP14.18□□□□□ -0.14
CD9-209ENST00000540891 CUBNO60494 3623 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 A0A0U1RQV5 110 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 F5H0A9 414 aaPredicted RBP14.17□□□□□ -0.14
CD9-209ENST00000540891 PLPP2O43688 288 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 TTRP02766 147 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 OR2T7P0C7T2 308 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
CD9-209ENST00000540891 OCLNQ16625 522 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 ZNF829Q3KNS6 432 aaPredicted RBP14.17□□□□□ -0.14
CD9-209ENST00000540891 ENTHD1Q8IYW4 607 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 SPICQ8N5J4 248 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 SPERTQ8NA61 448 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 PLPP7Q8NBV4 271 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 CSNK2A3Q8NEV1 391 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 OR2T27Q8NH04 317 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 OR51F2Q8NH61 342 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 RFKQ969G6 155 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 BEX2Q9BXY8 128 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 PATZ1Q9HBE1 687 aaKnown RBP14.17□□□□□ -0.14
CD9-209ENST00000540891 TMEM165Q9HC07 324 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 G6PC2Q9NQR9 355 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 LPAR3Q9UBY5 353 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 ZNF391Q9UJN7 358 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 GMPPBQ9Y5P6 360 aa14.17□□□□□ -0.14
CD9-209ENST00000540891 LRRC30A6NM36 301 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 CEACAM18A8MTB9 384 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 J3QRE1 110 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 FSTL3O95633 263 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 CST4P01036 141 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 FAM157CP0CG43 387 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 ANPEPP15144 967 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 ZFP36P26651 326 aaKnown RBP14.16□□□□□ -0.14
CD9-209ENST00000540891 SEC61A1P61619 476 aaKnown RBP14.16□□□□□ -0.14
CD9-209ENST00000540891 ZNF85Q03923 595 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 ZNF826PQ6ZT77 177 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 KRT74Q7RTS7 529 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 C11orf53Q8IXP5 236 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 OR10H4Q8NGA5 316 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 ITPKCQ96DU7 683 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 PAPOLGQ9BWT3 736 aaKnown RBP14.16□□□□□ -0.14
CD9-209ENST00000540891 FGF23Q9GZV9 251 aaPredicted RBP14.16□□□□□ -0.14
CD9-209ENST00000540891 FN3KRPQ9HA64 309 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 GPR84Q9NQS5 396 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 FAM118AQ9NWS6 357 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.16□□□□□ -0.14
CD9-209ENST00000540891 R4GMQ9 66 aa14.16□□□□□ -0.14
CD9-209ENST00000540891 PPIAL4EA0A075B759 164 aa14.15□□□□□ -0.14
CD9-209ENST00000540891 TRAV20A0A0B4J274 112 aa14.15□□□□□ -0.14
CD9-209ENST00000540891 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.15□□□□□ -0.14
CD9-209ENST00000540891 LOC100130705A0A1B0GUX0 176 aa14.15□□□□□ -0.14
CD9-209ENST00000540891 KIAA1324LA8MWY0 1029 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms