RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MTRF1O75570 445 aaKnown RBP13.18□□□□□ -0.3
DDB1-218ENST00000540784 HPXP02790 462 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 CA6P23280 308 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 C21orf33P30042 268 aaPredicted RBP13.18□□□□□ -0.3
DDB1-218ENST00000540784 TNFAIP6P98066 277 aaPredicted RBP13.18□□□□□ -0.3
DDB1-218ENST00000540784 CLEC12BQ2HXU8 276 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 RBM48Q5RL73 367 aaKnown RBP13.18□□□□□ -0.3
DDB1-218ENST00000540784 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 PRSS35Q8N3Z0 413 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 OR2G2Q8NGZ5 317 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 RDH5Q92781 318 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 RNF166Q96A37 237 aaPredicted RBP13.18□□□□□ -0.3
DDB1-218ENST00000540784 ELMOD3Q96FG2 381 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
DDB1-218ENST00000540784 BABAM2Q9NXR7 383 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 FRRS1LQ9P0K9 344 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 USF3Q68DE3 2245 aa13.18□□□□□ -0.3
DDB1-218ENST00000540784 H0YL77 283 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 GMDSO60547 372 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 IGLV3-1P01715 115 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 CDK1P06493 297 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 CD55P08174 381 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 COL8A2P25067 703 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 PDLIM4P50479 330 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 CCR9P51686 369 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 RIPPLY1Q0D2K3 151 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 ALKBH1Q13686 389 aaKnown RBP13.17□□□□□ -0.3
DDB1-218ENST00000540784 TESK1Q15569 626 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 OR8G1Q15617 311 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 OR8B8Q15620 311 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 CARTPTQ16568 116 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 ODF4Q2M2E3 257 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 WDR38Q5JTN6 314 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 OR2G6Q5TZ20 316 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 CLEC2AQ6UVW9 174 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 ZNF525Q8N782 197 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 SEMA6DQ8NFY4 1073 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 GATAD2BQ8WXI9 593 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 SOX7Q9BT81 388 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 DUSP21Q9H596 190 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 MYOZ1Q9NP98 299 aaPredicted RBP13.17□□□□□ -0.3
DDB1-218ENST00000540784 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 IL19Q9UHD0 177 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 ERGIC3Q9Y282 383 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 PCDHGB5Q9Y5G0 923 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 ARFGEF3Q5TH69 2177 aa13.17□□□□□ -0.3
DDB1-218ENST00000540784 A0A1B0GTI1 187 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 A0A1B0GVI7 797 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 A0A1B0GWJ7 208 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 LOC390937A0A1W2PQ73 354 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 E9PI62 339 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 LYNX1G3V0Z9 82 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 MLNRO43193 412 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 SYT7O43581 403 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 CSF3P09919 207 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 LYNX1P0DP58 116 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 TNFRSF1AP19438 455 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 CRHBPP24387 322 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 GNALP38405 381 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 CRYBB2P43320 205 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 KIR3DL2P43630 455 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 SRP9P49458 86 aaKnown RBP13.16□□□□□ -0.3
DDB1-218ENST00000540784 NANOS3P60323 173 aaKnown RBP13.16□□□□□ -0.3
DDB1-218ENST00000540784 MRPS11P82912 194 aaKnown RBP13.16□□□□□ -0.3
DDB1-218ENST00000540784 TNK1Q13470 666 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 TMEM244Q5VVB8 128 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 RNLSQ5VYX0 342 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 DOK3Q7L591 496 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 KLBQ86Z14 1044 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 KRTAP1-3Q8IUG1 177 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 RDH10Q8IZV5 341 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 SPERTQ8NA61 448 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 OR10AD1Q8NGE0 317 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 OR52N1Q8NH53 320 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 PIGCQ92535 297 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 Q96MF0 132 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 SAP30LQ9HAJ7 183 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 RHBDD3Q9Y3P4 386 aa13.16□□□□□ -0.3
DDB1-218ENST00000540784 IGHV1-69-2A0A0G2JMI3 117 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
DDB1-218ENST00000540784 TRBV2A0A0J9YWF9 115 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 F5H5P2 479 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 CDC14BO60729 498 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 DHRS3O75911 302 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 NCR1O76036 304 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 CST4P01036 141 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 ISG15P05161 165 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 RPSAP08865 295 aaKnown RBP13.15□□□□□ -0.3
DDB1-218ENST00000540784 UBCP0CG48 685 aaKnown RBP13.15□□□□□ -0.3
DDB1-218ENST00000540784 ZNF12P17014 697 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 ACKR3P25106 362 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 TGM4P49221 684 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 SLC35A2P78381 396 aa13.15□□□□□ -0.3
DDB1-218ENST00000540784 MZT1Q08AG7 82 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms