RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 RIN1Q13671 783 aa21.27■■□□□ 1
TTC3-225ENST00000540756 OXA1LQ15070 435 aa21.27■■□□□ 1
TTC3-225ENST00000540756 SF3B4Q15427 424 aaKnown RBP eCLIP21.27■■□□□ 14e-16■■■■■ 40.8
TTC3-225ENST00000540756 C1orf100Q5SVJ3 147 aa21.27■■□□□ 1
TTC3-225ENST00000540756 MTFR2Q6P444 385 aa21.27■■□□□ 1
TTC3-225ENST00000540756 NCCRP1Q6ZVX7 275 aaPredicted RBP21.27■■□□□ 1
TTC3-225ENST00000540756 PGAP1Q75T13 922 aa21.27■■□□□ 1
TTC3-225ENST00000540756 CXorf67Q86X51 503 aaPredicted RBP21.27■■□□□ 1
TTC3-225ENST00000540756 GCDHQ92947 438 aaPredicted RBP21.27■■□□□ 1
TTC3-225ENST00000540756 C1QTNF6Q9BXI9 259 aa21.27■■□□□ 1
TTC3-225ENST00000540756 RHBDL2Q9NX52 303 aa21.27■■□□□ 1
TTC3-225ENST00000540756 TPRP12270 2363 aaKnown RBP21.26■□□□□ 0.99
TTC3-225ENST00000540756 LANCL1O43813 399 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 CNOT4O95628 575 aaKnown RBP21.26■□□□□ 0.99
TTC3-225ENST00000540756 COX5BP10606 129 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 FAM3AP98173 230 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 PLP2Q04941 152 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 RNASE12Q5GAN4 147 aaKnown RBP21.26■□□□□ 0.99
TTC3-225ENST00000540756 Q6ZNX1 250 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 ZNF101Q8IZC7 436 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 SEMA6DQ8NFY4 1073 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 OR6M1Q8NGM8 313 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 ZFP3Q96NJ6 502 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 OR51B6Q9H340 312 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 SH3BGRL2Q9UJC5 107 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 MED19A0JLT2 244 aaPredicted RBP21.26■□□□□ 0.99
TTC3-225ENST00000540756 ISPDA4D126 451 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 TMEM127O75204 238 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 MTRF1O75570 445 aaKnown RBP21.26■□□□□ 0.99
TTC3-225ENST00000540756 GLI4P10075 376 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 PTGER4P35408 488 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 ART1P52961 327 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 GAL3ST1Q99999 423 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 ABCG5Q9H222 651 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 ETV7Q9Y603 341 aa21.26■□□□□ 0.99
TTC3-225ENST00000540756 LOC100289279A0A1B0GTE1 492 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 hCG_38984A0A1B0GV85 526 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 PTHLHP12272 177 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 ARSBP15848 533 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 CDK2P24941 298 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 PTBP1P26599 531 aaKnown RBP eCLIP21.25■□□□□ 0.995e-7■□□□□ 8
TTC3-225ENST00000540756 TIMP3P35625 211 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 ZNF93P35789 620 aaPredicted RBP21.25■□□□□ 0.99
TTC3-225ENST00000540756 WNT5AP41221 380 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 GSK3AP49840 483 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 HLXQ14774 488 aaPredicted RBP21.25■□□□□ 0.99
TTC3-225ENST00000540756 CRIP3Q6Q6R5 217 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 NANOS1Q8WY41 292 aaKnown RBP21.25■□□□□ 0.99
TTC3-225ENST00000540756 CMTM3Q96MX0 182 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 MRI1Q9BV20 369 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 POFUT1Q9H488 388 aa21.25■□□□□ 0.99
TTC3-225ENST00000540756 METTL17Q9H7H0 456 aaPredicted RBP21.25■□□□□ 0.99
TTC3-225ENST00000540756 AGFG2O95081 481 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 SERPINA5P05154 406 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 SPNP16150 400 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 THBS4P35443 961 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 UBE2NP61088 152 aaKnown RBP21.24■□□□□ 0.99
TTC3-225ENST00000540756 TRIM16LQ309B1 348 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 HAVCR1Q96D42 359 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 FAM122AQ96E09 287 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 SORCS2Q96PQ0 1159 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 CHST5Q9GZS9 411 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 GPR173Q9NS66 373 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 TUBD1Q9UJT1 453 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 STARD10Q9Y365 291 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 HCKP08631 526 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 ZNF14P17017 642 aaPredicted RBP21.24■□□□□ 0.99
TTC3-225ENST00000540756 ZNF474Q6S9Z5 364 aaPredicted RBP21.24■□□□□ 0.99
TTC3-225ENST00000540756 WDR31Q8NA23 367 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 SLC30A7Q8NEW0 376 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 RFT1Q96AA3 541 aa21.24■□□□□ 0.99
TTC3-225ENST00000540756 PRRG2O14669 202 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 KDM4BO94953 1096 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 CEACAM8P31997 349 aaPredicted RBP21.23■□□□□ 0.99
TTC3-225ENST00000540756 APLNRP35414 380 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 OR3A4PP47883 348 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 IDH3GP51553 393 aaPredicted RBP21.23■□□□□ 0.99
TTC3-225ENST00000540756 PMPCAQ10713 525 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 GK2Q14410 553 aaPredicted RBP21.23■□□□□ 0.99
TTC3-225ENST00000540756 PYHIN1Q6K0P9 492 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 SSC4DQ8WTU2 575 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 S100A16Q96FQ6 103 aaKnown RBP21.23■□□□□ 0.99
TTC3-225ENST00000540756 SP140LQ9H930 580 aa21.23■□□□□ 0.99
TTC3-225ENST00000540756 DGCR2P98153 550 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 RIPPLY1Q0D2K3 151 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 DPPA2Q7Z7J5 298 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 PIGTQ969N2 578 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 SPSB4Q96A44 273 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 FOXRED1Q96CU9 486 aaPredicted RBP21.22■□□□□ 0.99
TTC3-225ENST00000540756 CRIM1Q9NZV1 1036 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 LDLRAD4O15165 306 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 EEF1E1O43324 174 aaKnown RBP21.22■□□□□ 0.99
TTC3-225ENST00000540756 CTAG2O75638 210 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 HLA-DQB1P01920 261 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 PTH2RP49190 550 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 GDPD3Q7L5L3 318 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 ANGPTL5Q86XS5 388 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 OR5D18Q8NGL1 313 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 PP6455Q8WZ26 134 aa21.22■□□□□ 0.99
TTC3-225ENST00000540756 TP63Q9H3D4 680 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms