RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 GPRIN2O60269 458 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 PAPLNO95428 1278 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 WNT11O96014 354 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 ANXA4P09525 319 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-214ENST00000540539 ZNF7P17097 686 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-214ENST00000540539 AKR1C4P17516 323 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 MC4RP32245 332 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 RND2P52198 227 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 LTBQ06643 244 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 GAS6Q14393 721 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 TP53I3Q53FA7 332 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 TMEM205Q6UW68 189 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 FBXW12Q6X9E4 464 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 DND1Q8IYX4 353 aaKnown RBP8.44□□□□□ -1.06
CLIP1-214ENST00000540539 KREMEN2Q8NCW0 462 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 SLC26A10Q8NG04 563 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 OR13C9Q8NGT0 318 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 CPT1CQ8TCG5 803 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 SLC6A7Q99884 636 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 SEMA3CQ99985 751 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 VN1R3Q9BXE9 311 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 OR6C3Q9NZP0 311 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 CYP8B1Q9UNU6 501 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 MYO7AQ13402 2215 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 A0A0C4DFX4 3053 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 PRAMEF27A3QJZ7 478 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 EIF1AYO14602 144 aaKnown RBP8.44□□□□□ -1.06
CLIP1-214ENST00000540539 C1QL1O75973 258 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 DANCRP0C864 163 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 MAKP20794 623 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 PPP1CCP36873 323 aaKnown RBP8.44□□□□□ -1.06
CLIP1-214ENST00000540539 EIF1AXP47813 144 aaKnown RBP8.44□□□□□ -1.06
CLIP1-214ENST00000540539 CAMLGP49069 296 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 CX3CR1P49238 355 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 RAC3P60763 192 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 SLC35A1P78382 337 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 FOXF1Q12946 379 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 ZNF429Q86V71 674 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 OR51A2Q8NGJ7 313 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 LKAAEAR1Q8TD35 194 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 GPR119Q8TDV5 335 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 OR1E3Q8WZA6 343 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 MOB3AQ96BX8 217 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 SH2B3Q9UQQ2 575 aa8.44□□□□□ -1.06
CLIP1-214ENST00000540539 TRAV18A0A075B6X5 111 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 MED19A0JLT2 244 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 LINC01553A4QN01 128 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 VSTM2BA6NLU5 285 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 EFEMP2O95967 443 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 OR2T7P0C7T2 308 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 MC5RP33032 325 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 PRSS3P35030 304 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 VIPR2P41587 438 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 RANP62826 216 aaKnown RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 FAM3AP98173 230 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 NFATC2Q13469 925 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 EIF2B1Q14232 305 aaKnown RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TOMM20LQ6UXN7 152 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TEX43Q6ZNM6 134 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 GLT6D1Q7Z4J2 308 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 OR56A1Q8NGH5 318 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TMEM239Q8WW34 195 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 DYRK2Q92630 601 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 MOAP1Q96BY2 351 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 CTHRC1Q96CG8 243 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TVP23CQ96ET8 276 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 ACY3Q96HD9 319 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 LOXL4Q96JB6 756 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 ZNF48Q96MX3 618 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 MS4A8Q9BY19 250 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 CIPCQ9C0C6 399 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 MEGF9Q9H1U4 602 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 PLXNA4Q9HCM2 1894 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TRAV30A0A087WSZ9 112 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 A0A1B0GW64 132 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 VSTM5A8MXK1 200 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 K7ERU9 68 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 ATXN7O15265 892 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 SLC25A17O43808 307 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TRAPPC6AO75865 159 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 PDGFBP01127 241 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 CSN2P05814 226 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 CA3P07451 260 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 EFNB2P52799 333 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 SLC16A1P53985 500 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 BIDP55957 195 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 GNB2P62879 340 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 CYCSP99999 105 aaKnown RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 PRSS8Q16651 343 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 ARHGAP11BQ3KRB8 267 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 AMZ1Q400G9 498 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TPTE2P1Q5T6R2 138 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 PAQR9Q6ZVX9 377 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 MBOAT2Q6ZWT7 520 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 LSRQ86X29 649 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-214ENST00000540539 TEX26Q8N6G2 289 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 STXBP6Q8NFX7 210 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 OR2M7Q8NG81 312 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 GPX8Q8TED1 209 aa8.43□□□□□ -1.06
CLIP1-214ENST00000540539 ZCCHC14Q8WYQ9 949 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms