RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 PRODHO43272 600 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 SELENOFO60613 162 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ABHD16AO95870 558 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 HPXP02790 462 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 H2AFB1P0C5Y9 115 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 H2AFB2P0C5Z0 115 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 NAT2P11245 290 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 PAICSP22234 425 aaKnown RBP7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 OTX1P32242 354 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 MMP15P51511 669 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ALDH3A2P51648 485 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 KRTAP10-3P60369 221 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 RPS23P62266 143 aaKnown RBP7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 PSG7Q13046 419 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 APOFQ13790 326 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZNF718Q3SXZ3 478 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZIK1Q3SY52 487 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 SLC35D3Q5M8T2 416 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 NKAPLQ5M9Q1 402 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 C11orf87Q6NUJ2 197 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ZBTB49Q6ZSB9 765 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ERI1Q8IV48 349 aaKnown RBP7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 C1orf174Q8IYL3 243 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 OR6N2Q8NGY6 317 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 TMEM163Q8TC26 289 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 HAVCR1Q96D42 359 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 CMBLQ96DG6 245 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 SLAMF6Q96DU3 332 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 PLEKHA8Q96JA3 519 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 MEGF10Q96KG7 1140 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 HRASLS5Q96KN8 279 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 INTS14Q96SY0 518 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ATF6BQ99941 703 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 SLC30A2Q9BRI3 323 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 ABHD6Q9BV23 337 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 MS4A7Q9GZW8 240 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 RIBC2Q9H4K1 309 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 CENPMQ9NSP4 180 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 NECAP2Q9NVZ3 263 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 RNF114Q9Y508 228 aa7.43□□□□□ -1.22
TRAPPC1-202ENST00000540486 M0R233 179 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 RP2O75695 350 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 IGHV2-5P01817 119 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 OPN1MWP04001 364 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 CSF1P09603 554 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 OPN1MW2P0DN77 364 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 OPN1MW3P0DN78 364 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 ALOX5APP20292 161 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 KLF3P57682 345 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 ECH1Q13011 328 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 EIF2B1Q14232 305 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 SPRNQ5BIV9 151 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 NXNL2Q5VZ03 156 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 ARL9Q6T311 187 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 UNQ6126/PRO20091Q6UXV3 157 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 MEPCEQ7L2J0 689 aaKnown RBP7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 SHFQ7M4L6 423 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 OTOSQ8NHW6 89 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 RNF133Q8WVZ7 376 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 IPCEF1Q8WWN9 437 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 YIPF5Q969M3 257 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 MBOAT4Q96T53 435 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 KCNJ15Q99712 375 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 C9orf16Q9BUW7 83 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 TEX12Q9BXU0 123 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 TOR3AQ9H497 397 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 C1RLQ9NZP8 487 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 AASSQ9UDR5 926 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 ENOPH1Q9UHY7 261 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 KLHDC2Q9Y2U9 406 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 NOTCH3Q9UM47 2321 aa7.42□□□□□ -1.22
TRAPPC1-202ENST00000540486 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 A0A1W2PPW3 197 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 ERICH4A6NGS2 130 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 C17orf100A8MU93 164 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 PRR32B1ATL7 298 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 M0R135 149 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 NCR1O76036 304 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 LCATP04180 440 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 KITLGP21583 273 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 TUBG1P23258 451 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 NAA10P41227 235 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 MAGEB1P43366 347 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 RGS6P49758 472 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 PRKXP51817 358 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 RAD23AP54725 363 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 TPTEP56180 551 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 SELENOVP59797 346 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 RPL15P61313 204 aaKnown RBP7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 RPS7P62081 194 aaKnown RBP7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 ELF3P78545 371 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 LRRC36Q1X8D7 754 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 SNAI3Q3KNW1 292 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 KLF17Q5JT82 389 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 LPCAT4Q643R3 524 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 CCBE1Q6UXH8 406 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 FBXW12Q6X9E4 464 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 Q6ZR03 302 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 C9orf139Q6ZV77 190 aa7.41□□□□□ -1.22
TRAPPC1-202ENST00000540486 SLC16A9Q7RTY1 509 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms