RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ZG16BQ96DA0 208 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM210BQ96KR6 192 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 CD180Q99467 661 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 PDE7BQ9NP56 450 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SIDT1Q9NXL6 827 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 ZDBF2Q9HCK1 2354 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 DOCK9Q9BZ29 2069 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 IGLV3-16A0A075B6K0 115 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 KIR2DL5BA0A0G2JN68 375 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 KIR2DL5BA0A0G2JPC4 375 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SYNDIG1LA6NDD5 238 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 PEX12O00623 359 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 GALR2O43603 387 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OR5H8P0DN80 308 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SCAND1P57086 179 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC35D2Q76EJ3 337 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF765Q7L2R6 523 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC35E3Q7Z769 313 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 KIR2DL5AQ8N109 375 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SPEM1Q8N4L4 309 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OIT3Q8WWZ8 545 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 TMEM159Q96B96 161 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 MCHR1Q99705 422 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 ELOVL1Q9BW60 279 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 LGR4Q9BXB1 951 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OR8D2Q9GZM6 311 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 USP36Q9P275 1121 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 ZFP30Q9Y2G7 519 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 CHD3Q12873 2000 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 TRAV8-7A0A075B6U6 113 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 OR2AG2A6NM03 316 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 ZNF888P0CJ79 500 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 F3P13726 295 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 ATP1B2P14415 290 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 MAKP20794 623 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 FHITP49789 147 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 AGERQ15109 404 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 RPUSD3Q6P087 351 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC35F2Q8IXU6 374 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 C11orf42Q8N5U0 333 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 OR51L1Q8NGJ5 315 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 PBDC1Q9BVG4 233 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC7A7Q9UM01 511 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 KNL1Q8NG31 2342 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 SDK1Q7Z5N4 2213 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 DNAH14Q0VDD8 3507 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 K7EPK0 472 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 SLCO2B1O94956 709 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 RABIFP47224 123 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 LSSP48449 732 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 ADAM8P78325 824 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 DLK1P80370 383 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM3AP98173 230 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 IQCJQ1A5X6 159 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM71E2Q8N5Q1 922 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 ZDHHC22Q8N966 263 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 RPS4Y2Q8TD47 263 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 C6orf106Q9H6K1 298 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 OR1A2Q9Y585 309 aa8.45□□□□□ -1.06
CTNNA1-243ENST00000540387 CACNA1IQ9P0X4 2223 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 A0A1W2PN81 502 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 TSPAN2O60636 221 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 SCGNO76038 276 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 SEMA4FO95754 770 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC16A8O95907 504 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CHRNA7P36544 502 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 GLIPR1P48060 266 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CXCL12P48061 93 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CAMLGP49069 296 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 IDH3GP51553 393 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PRKAG1P54619 331 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 RAB32Q13637 225 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CHRFAM7AQ494W8 412 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 Q499Y3 187 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PRAMEF8Q5VWM4 474 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PRAMEF7Q5VXH5 474 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FAHD2BQ6P2I3 314 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FAM185AQ8N0U4 392 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 KDM8Q8N371 416 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 OR13C9Q8NGT0 318 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FAHD2AQ96GK7 314 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 PRRT1Q99946 306 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 RARRES2Q99969 163 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 DPEP2Q9H4A9 486 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 C20orf141Q9NUB4 165 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 ZCCHC3Q9NUD5 404 aaKnown RBP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FOXJ2Q9P0K8 574 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FOXD3Q9UJU5 478 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 TECTAO75443 2155 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 NUP210LQ5VU65 1888 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 NKX6-3A6NJ46 265 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 H0YL77 283 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 CDC40O60508 579 aaKnown RBP eCLIP8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 IGLV3-19P01714 112 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 DANCRP0C864 163 aa8.44□□□□□ -1.06
CTNNA1-243ENST00000540387 FGF5P12034 268 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms