RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SLC2A4RGQ9NR83 387 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
MSH6-210ENST00000540021 SMIM10L1P0DMW3 83 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 VSIG8P0DPA2 414 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 ZBTB25P24278 435 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 SCAND1P57086 179 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 MICBQ29980 383 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 H1FNTQ75WM6 255 aaPredicted RBP11.57□□□□□ -0.56
MSH6-210ENST00000540021 GKN2Q86XP6 184 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 MCHR2Q969V1 340 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 SMIM10Q96HG1 83 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 LPAR3Q9UBY5 353 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 NOTCH4Q99466 2003 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 MSGN1A6NI15 193 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 IFNA2P01563 188 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 CHRM2P08172 466 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 IL11P20809 199 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 EGR4Q05215 589 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 HFEQ30201 348 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 RBMS3Q6XE24 437 aaKnown RBP11.57□□□□□ -0.56
MSH6-210ENST00000540021 SLC22A8Q8TCC7 542 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 CTHRC1Q96CG8 243 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
MSH6-210ENST00000540021 ZNF426Q9BUY5 554 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 SLC5A6Q9Y289 635 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 KPTNQ9Y664 436 aa11.57□□□□□ -0.56
MSH6-210ENST00000540021 ASAH2BP0C7U1 165 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 ABCD3P28288 659 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 CTHP32929 405 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 TAS2R46P59540 309 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 PLAURQ03405 335 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 IKZF1Q13422 519 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 ZNF345Q14585 488 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 PRAMEF20Q5VT98 475 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 GLYATL2Q8WU03 294 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 KLHDC3Q9BQ90 382 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 NRIP2Q9BQI9 281 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 TGFBR3LH3BV60 316 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 EIF3GO75821 320 aaKnown RBP eCLIP11.56□□□□□ -0.56
MSH6-210ENST00000540021 IFNA4P05014 189 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 GABREP78334 506 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 TMEM176BQ3YBM2 270 aaPredicted RBP11.56□□□□□ -0.56
MSH6-210ENST00000540021 BRICD5Q6PL45 260 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 RTL10Q7L3V2 364 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 ZSCAN4Q8NAM6 433 aaPredicted RBP11.56□□□□□ -0.56
MSH6-210ENST00000540021 TSTD1Q8NFU3 115 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 MRPL22Q9NWU5 206 aaKnown RBP11.56□□□□□ -0.56
MSH6-210ENST00000540021 FBXL17Q9UF56 701 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 MIOXQ9UGB7 285 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 MPTX1A8MV57 137 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 ABHD16AO95870 558 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 MYF5P13349 255 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 ZNF16P17020 682 aaPredicted RBP11.56□□□□□ -0.56
MSH6-210ENST00000540021 EPHA1P21709 976 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 HAGHQ16775 308 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 CATSPERDQ86XM0 798 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 RAB33BQ9H082 229 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 KLHL13Q9P2N7 655 aa11.56□□□□□ -0.56
MSH6-210ENST00000540021 COL4A4P53420 1690 aaPredicted RBP11.55□□□□□ -0.56
MSH6-210ENST00000540021 EFSO43281 561 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TNFSF14O43557 240 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TXNDC12O95881 172 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 IGHG1P01857 330 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 SLC25A4P12235 298 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 BCKDHBP21953 392 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 MTCP1P56278 107 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 UBE2KP61086 200 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 YPEL5P62699 121 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 DEFA6Q01524 100 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 PDCD1Q15116 288 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TAF9Q16594 264 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 C9orf152Q5JTZ5 239 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 FAM109BQ6ICB4 259 aaPredicted RBP11.55□□□□□ -0.56
MSH6-210ENST00000540021 IL34Q6ZMJ4 242 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TCEAL7Q9BRU2 100 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 DENND4CQ5VZ89 1909 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 G3V3Y1 287 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TNFRSF10CO14798 259 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 RER1O15258 196 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 FOXS1O43638 330 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 CHATP28329 748 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 ZNF121P58317 390 aaPredicted RBP11.55□□□□□ -0.56
MSH6-210ENST00000540021 ISXQ2M1V0 245 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 ACTBL2Q562R1 376 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 AWAT1Q58HT5 328 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 FAM209BQ5JX69 171 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 OR5T1Q8NG75 326 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 ANGPTL7O43827 346 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 OR2C1O95371 312 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 SFT2D2O95562 160 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 BPNT1O95861 308 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 CD37P11049 281 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 C4orf17Q53FE4 359 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 TMEM240Q5SV17 173 aa11.55□□□□□ -0.56
MSH6-210ENST00000540021 PRSS54Q6PEW0 395 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms