RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 UFSP2Q9NUQ7 469 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 TMEM160Q9NX00 188 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 MRM2Q9UI43 246 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 RHBDD3Q9Y3P4 386 aa15.39■□□□□ 0.05
SNRPA1-203ENST00000540017 A0A1W2PQL4 384 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF670-ZNF695F2Z2N8 137 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 GABRB1P18505 474 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 CFL1P23528 166 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 DCTDP32321 178 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 RIDAP52758 137 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 BTG1P62324 171 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 OR8B8Q15620 311 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 SLC25A30Q5SVS4 291 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 IL17RELQ6ZVW7 336 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 LRRC28Q86X40 367 aaPredicted RBP15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 PBOV1Q9GZY1 135 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 RGCCQ9H4X1 137 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 FAM118AQ9NWS6 357 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 UBAP1Q9NZ09 502 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 GMPPBQ9Y5P6 360 aa15.38■□□□□ 0.05
SNRPA1-203ENST00000540017 ANKRD30BLA7E2S9 258 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 FAM20BO75063 409 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 MSMBP08118 114 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 ANPEPP15144 967 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 POU4F2Q12837 409 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 TMED1Q13445 227 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 RCN1Q15293 331 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 OCLNQ16625 522 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF181Q2M3W8 571 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 FAM120AOSQ5T036 256 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF684Q5T5D7 378 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 LPCAT4Q643R3 524 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 WDR86Q86TI4 376 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 ENTHD1Q8IYW4 607 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 Q8TCH9 128 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 RFKQ969G6 155 aa15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 NOP16Q9Y3C1 178 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-203ENST00000540017 A0A0U1RQV5 110 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 LOC100130705A0A1B0GUX0 176 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 ACOD1A6NK06 481 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 IFNL4K9M1U5 179 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 PHYHO14832 338 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 PLPP2O43688 288 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 IGLV3-1P01715 115 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 OR2T7P0C7T2 308 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 DVL1P1P54792 670 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 GABPB1Q06547 395 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 EGR3Q06889 387 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 LRRC36Q1X8D7 754 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 CR1LQ2VPA4 569 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 CHRFAM7AQ494W8 412 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 KLBQ86Z14 1044 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 GALNT4Q8N4A0 578 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 OR10H4Q8NGA5 316 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 OR2T27Q8NH04 317 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 RAB39BQ96DA2 213 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 TMEM165Q9HC07 324 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 G6PC2Q9NQR9 355 aa15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-203ENST00000540017 TTRP02766 147 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 GRPP07492 148 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 ATP6V1E1P36543 226 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 MTNR1AP48039 350 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF85Q03923 595 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF829Q3KNS6 432 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 TMEM155Q4W5P6 130 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF826PQ6ZT77 177 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 SPERTQ8NA61 448 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 C19orf18Q8NEA5 215 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 CSNK2A3Q8NEV1 391 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 RHOXF1Q8NHV9 184 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 OR51E1Q8TCB6 317 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 ERGIC1Q969X5 290 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 TMEM186Q96B77 213 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 RNFT2Q96EX2 444 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 PAPOLGQ9BWT3 736 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 FGF23Q9GZV9 251 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 SHARPINQ9H0F6 387 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 PATZ1Q9HBE1 687 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 GPR84Q9NQS5 396 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 HIF1ANQ9NWT6 349 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 CDC42EP3Q9UKI2 254 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 R4GMQ9 66 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 CUBNO60494 3623 aa15.35■□□□□ 0.05
SNRPA1-203ENST00000540017 ZNF850A8MQ14 1090 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 LOC110117498-PIK3R3F6TDL0 507 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 J3QRE1 110 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 SLC16A6O15403 523 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 RPP14O95059 124 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 ZFP36P26651 326 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 PEX2P28328 305 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 MDH2P40926 338 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 SEC61A1P61619 476 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 MEDAGQ5VYS4 303 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 GLCCI1Q86VQ1 547 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 C11orf53Q8IXP5 236 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 YIPF7Q8N8F6 280 aa15.34■□□□□ 0.05
SNRPA1-203ENST00000540017 OR8S1Q8NH09 359 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms