RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 ARL6IP6Q8N6S5 226 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 GATAD2BQ8WXI9 593 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 RORBQ92753 470 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 C14orf79Q96F83 325 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 BABAM2Q9NXR7 383 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 CISD1Q9NZ45 108 aaKnown RBP13.29□□□□□ -0.28
DDB1-216ENST00000539739 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
DDB1-216ENST00000539739 XRCC2O43543 280 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 PTTG1O95997 202 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 SNAI3Q3KNW1 292 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 BCL2L15Q5TBC7 163 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 ZNF773Q6PK81 442 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 PRSS45Q7RTY3 260 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 TMEM200AQ86VY9 491 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 AKAP1Q92667 903 aaKnown RBP eCLIP13.28□□□□□ -0.28
DDB1-216ENST00000539739 OPALINQ96PE5 141 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 PBOV1Q9GZY1 135 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 ZNF442Q9H7R0 627 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 TRIM36Q9NQ86 728 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 CA10Q9NS85 328 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 NUFIP1Q9UHK0 495 aaKnown RBP13.28□□□□□ -0.28
DDB1-216ENST00000539739 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 CMAHPQ9Y471 501 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 GPRIN2O60269 458 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 SRSF10O75494 262 aaKnown RBP13.28□□□□□ -0.28
DDB1-216ENST00000539739 PNPP00491 289 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 CD40LGP29965 261 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 GCH1P30793 250 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 SSTR2P30874 369 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 CDH15P55291 814 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 TAS2R43P59537 309 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 SELENOVP59797 346 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 TLE4Q04727 773 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
DDB1-216ENST00000539739 MED22Q15528 200 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 TIGD6Q17RP2 521 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 ESCO2Q56NI9 601 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 SPATA46Q5T0L3 261 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 FDX2Q6P4F2 183 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 CATSPERDQ86XM0 798 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 KLBQ86Z14 1044 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 OR8B12Q8NGG6 310 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 SLC25A40Q8TBP6 338 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 OR2J1Q9GZK6 312 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 CLEC4MQ9H2X3 399 aaPredicted RBP13.28□□□□□ -0.28
DDB1-216ENST00000539739 RGCCQ9H4X1 137 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 G6PC2Q9NQR9 355 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 PTTG3PQ9NZH4 202 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 MBD2Q9UBB5 411 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 ZNF391Q9UJN7 358 aa13.28□□□□□ -0.28
DDB1-216ENST00000539739 ROS1P08922 2347 aa13.27□□□□□ -0.28
DDB1-216ENST00000539739 E7EQL1 145 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 APOBEC3AP31941 199 aaPredicted RBP13.27□□□□□ -0.29
DDB1-216ENST00000539739 THBS4P35443 961 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 HAAOP46952 286 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 SERPINB10P48595 397 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 TGM4P49221 684 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 ERVS71-1P61550 626 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 ALKBH1Q13686 389 aaKnown RBP13.27□□□□□ -0.29
DDB1-216ENST00000539739 SPHARQ15513 63 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 TBCEQ15813 527 aaPredicted RBP13.27□□□□□ -0.29
DDB1-216ENST00000539739 GFOD2Q3B7J2 385 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 ZNF295-AS1Q8N0V1 137 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 OR2G2Q8NGZ5 317 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 TMEM171Q8WVE6 324 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 NEUROG1Q92886 237 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 FBXW5Q969U6 566 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 MARS2Q96GW9 593 aaKnown RBP13.27□□□□□ -0.29
DDB1-216ENST00000539739 OPA3Q9H6K4 179 aa13.27□□□□□ -0.29
DDB1-216ENST00000539739 UTP20O75691 2785 aaKnown RBP13.27□□□□□ -0.29
DDB1-216ENST00000539739 PTPN13Q12923 2485 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 PLCE1Q9P212 2302 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 A0A0U1RQV5 110 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 HS3ST1O14792 307 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 ECDO95905 644 aaPredicted RBP13.26□□□□□ -0.29
DDB1-216ENST00000539739 MAP2K4P45985 399 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 FABP6P51161 128 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 CCR9P51686 369 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 GLYATL3Q5SZD4 288 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 RSBN1Q5VWQ0 802 aaPredicted RBP13.26□□□□□ -0.29
DDB1-216ENST00000539739 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
DDB1-216ENST00000539739 ZNF767PQ75MW2 155 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 PGAP1Q75T13 922 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 MRPL21Q7Z2W9 205 aaKnown RBP13.26□□□□□ -0.29
DDB1-216ENST00000539739 COMMD2Q86X83 199 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 ZNF485Q8NCK3 441 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 SYNPRQ8TBG9 265 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 ENKURQ8TC29 256 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 KLF14Q8TD94 323 aaPredicted RBP13.26□□□□□ -0.29
DDB1-216ENST00000539739 REEP6Q96HR9 211 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 FRRS1LQ9P0K9 344 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 SLC22A13Q9Y226 551 aa13.26□□□□□ -0.29
DDB1-216ENST00000539739 TRBV2A0A0J9YWF9 115 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 CENPXA8MT69 81 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 E9PI62 339 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 OR4A8P0C604 315 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 RAC2P15153 192 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 ZNF250P15622 560 aa13.25□□□□□ -0.29
DDB1-216ENST00000539739 BDH1Q02338 343 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms