RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 TMEM14AQ9Y6G1 99 aa12.54□□□□□ -0.4
USB1-203ENST00000539737 ZNF205O95201 554 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 LCATP04180 440 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 RAC2P15153 192 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 KITLGP21583 273 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 GATA3P23771 443 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 OPRL1P41146 370 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 ZNF154Q13106 437 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
USB1-203ENST00000539737 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
USB1-203ENST00000539737 SPATC1Q76KD6 591 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 C1QL4Q86Z23 238 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 RFKQ969G6 155 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 MBOAT4Q96T53 435 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 MNTQ99583 582 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 SP140LQ9H930 580 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 PTTG3PQ9NZH4 202 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
USB1-203ENST00000539737 LAMP5Q9UJQ1 280 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 NUP50Q9UKX7 468 aa12.53□□□□□ -0.4
USB1-203ENST00000539737 PHYHO14832 338 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 IGHV2-70P01814 119 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 CD55P08174 381 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 MRPL3P09001 348 aaKnown RBP12.52□□□□□ -0.41
USB1-203ENST00000539737 H2BFMP0C1H6 154 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 SELEP16581 610 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 HTR1FP30939 366 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 CX3CR1P49238 355 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 POU4F2Q12837 409 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 PSG7Q13046 419 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 TMED1Q13445 227 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 KCTD18Q6PI47 426 aaPredicted RBP12.52□□□□□ -0.41
USB1-203ENST00000539737 PACRGLQ8N7B6 248 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 OR2Z1Q8NG97 314 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 THEM6Q8WUY1 208 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 ASB17Q8WXJ9 295 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 HAVCR1Q96D42 359 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 CMBLQ96DG6 245 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 SLC29A1Q99808 456 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 OPA3Q9H6K4 179 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 SMPD3Q9NY59 655 aaPredicted RBP12.52□□□□□ -0.41
USB1-203ENST00000539737 HAO2Q9NYQ3 351 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 AUP1Q9Y679 476 aa12.52□□□□□ -0.41
USB1-203ENST00000539737 IGHV3-64DA0A0J9YX35 117 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 E9PQ18 207 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 IFNL4K9M1U5 179 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
USB1-203ENST00000539737 PRKXP51817 358 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 SNRPGP62308 76 aaKnown RBP12.51□□□□□ -0.41
USB1-203ENST00000539737 ZMYND11Q15326 602 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 MEDAGQ5VYS4 303 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 BCDIN3DQ7Z5W3 292 aaKnown RBP12.51□□□□□ -0.41
USB1-203ENST00000539737 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.51□□□□□ -0.41
USB1-203ENST00000539737 SPICQ8N5J4 248 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 KIR3DL3Q8N743 410 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 AMELYQ99218 206 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 DCLRE1BQ9H816 532 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 NIPAL2Q9H841 368 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 DNAJC27Q9NZQ0 273 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 NPTNQ9Y639 398 aa12.51□□□□□ -0.41
USB1-203ENST00000539737 SNTNA6NMZ2 147 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 XRCC2O43543 280 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 MPZL2O60487 215 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 FOXH1O75593 365 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 ANXA2P07355 339 aaKnown RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 ZNF12P17014 697 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 ALOX5APP20292 161 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 PEX2P28328 305 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 PSMA6P60900 246 aaKnown RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 ELF3P78545 371 aaPredicted RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 CDK5R2Q13319 367 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 GK2Q14410 553 aaPredicted RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 HLXQ14774 488 aaPredicted RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 SLC25A30Q5SVS4 291 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 DEGS2Q6QHC5 323 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 PGAP1Q75T13 922 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 MRPL21Q7Z2W9 205 aaKnown RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 KRT77Q7Z794 578 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 SLC35F2Q8IXU6 374 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 KLHL36Q8N4N3 616 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 ZNF555Q8NEP9 628 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 OR51G2Q8NGK0 314 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 ZNF582Q96NG8 517 aaPredicted RBP12.5□□□□□ -0.41
USB1-203ENST00000539737 MROQ9BYG7 248 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 VCXQ9H320 206 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 ADGRL4Q9HBW9 690 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 CLN6Q9NWW5 311 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 IL19Q9UHD0 177 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.5□□□□□ -0.41
USB1-203ENST00000539737 PPP1R3CQ9UQK1 317 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 KLHDC2Q9Y2U9 406 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 INSIG2Q9Y5U4 225 aa12.5□□□□□ -0.41
USB1-203ENST00000539737 A0A0G2JK05 382 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 IQCF6A8MYZ5 107 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 ZNF670-ZNF695F2Z2N8 137 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 CD80P33681 288 aa12.49□□□□□ -0.41
USB1-203ENST00000539737 HOXA4Q00056 320 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms