RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 TRGV10A0A0A0MS01 117 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 B4GALT3O60512 393 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SIX6O95475 246 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 FAM157BP0CG42 384 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 IGFBP6P24592 240 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 GNG3P63215 75 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM268Q5VZI3 342 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 FAM122CQ6P4D5 195 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 FBXL14Q8N1E6 418 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 OR4D9Q8NGE8 314 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 UTRNP46939 3433 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 LY86O95711 162 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 RPL12P30050 165 aaKnown RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 HYAL1Q12794 435 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 AGERQ15109 404 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 LRRC10Q5BKY1 277 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 C9orf152Q5JTZ5 239 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 GFRALQ6UXV0 394 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 OR5B3Q8NH48 314 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ERGIC1Q969X5 290 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 CLDN23Q96B33 292 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 MED30Q96HR3 178 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SUCNR1Q9BXA5 334 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 LY75O60449 1722 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 WNK3Q9BYP7 1800 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 DCTN6O00399 190 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 IL5P05113 134 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 B4GALNT1Q00973 533 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 MYBPHQ13203 477 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 HLA-BQ31612 363 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 RPL7L1Q6DKI1 246 aaKnown RBP5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM179BQ7Z7N9 219 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 ZDHHC22Q8N966 263 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OR1F12Q8NHA8 337 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 RNF167Q9H6Y7 350 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 MED29Q9NX70 200 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 IL20Q9NYY1 176 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 PDCD11Q14690 1871 aaKnown RBP5.84□□□□□ -1.47
LSAMP-207ENST00000539563 SLC17A2O00624 439 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 NKX2-2O95096 273 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TSPAN12O95859 305 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 RRASP10301 218 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 PRICKLE4Q2TBC4 344 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 SOWAHCQ53LP3 525 aaPredicted RBP5.84□□□□□ -1.47
LSAMP-207ENST00000539563 PXDC1Q5TGL8 231 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TRAT1Q6PIZ9 186 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 C17orf78Q8N4C9 275 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 ANKRD53Q8N9V6 530 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 NUDT8Q8WV74 236 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 COMMD5Q9GZQ3 224 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 PRDM7Q9NQW5 492 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM30CPA0ZSE6 113 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OR5H15A6NDH6 313 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM235A6NFC5 223 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OR5H1A6NKK0 313 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 WDR1O75083 606 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 RAE1P78406 368 aaKnown RBP5.84□□□□□ -1.47
LSAMP-207ENST00000539563 C12orf73Q69YU5 71 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 ANKRD16Q6P6B7 361 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OR2W3Q7Z3T1 314 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 FAM58AQ8N1B3 248 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OR1J1Q8NGS3 322 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OTOSQ8NHW6 89 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 NMES1Q9C002 83 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 IKZF5Q9H5V7 419 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM265A0A087WTH1 108 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 TRAV17A0A0B4J275 112 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 CHEK1O14757 476 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 SCAND1P57086 179 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 H3F3CQ6NXT2 135 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 BPIFCQ8NFQ6 507 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 OR4Q3Q8NH05 313 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 GSX2Q9BZM3 304 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 GAB2Q9UQC2 676 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 LRP12Q9Y561 859 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 MYO7AQ13402 2215 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 CYTIPO60759 359 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 GABRB1P18505 474 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 COX5AP20674 150 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 FOXF1Q12946 379 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 PAQR6Q6TCH4 344 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 SLC36A1Q7Z2H8 476 aa5.84□□□□□ -1.47
LSAMP-207ENST00000539563 PINX1Q96BK5 328 aaKnown RBP5.84□□□□□ -1.47
LSAMP-207ENST00000539563 NME2P1O60361 137 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 ADRB1P08588 477 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 ZBTB25P24278 435 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 OPRM1P35372 400 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 TAGLNQ01995 201 aaKnown RBP5.84□□□□□ -1.48
LSAMP-207ENST00000539563 MPPED2Q15777 294 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 DRAM2Q6UX65 266 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 BATF2Q8N1L9 274 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.84□□□□□ -1.48
LSAMP-207ENST00000539563 OR8B4Q96RC9 309 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 TNFRSF12AQ9NP84 129 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 WNT16Q9UBV4 365 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 FAM96BQ9Y3D0 163 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 TRGV8A0A0C4DH27 118 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 OR6C68A6NDL8 312 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 SEC14L6B5MCN3 397 aa5.84□□□□□ -1.48
LSAMP-207ENST00000539563 PEX11BO96011 259 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms