RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 HMGCS1Q01581 520 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 LTBQ06643 244 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 AESQ08117 197 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ELAVL2Q12926 359 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MLLT11Q13015 90 aaPredicted RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 DYNC1I2Q13409 638 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 UNC119Q13432 240 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TMEM187Q14656 261 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SPCS2Q15005 226 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 PSMD5Q16401 504 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF658BQ4V348 819 aaPredicted RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 VWA2Q5GFL6 755 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CPTPQ5TA50 214 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 METTL21CQ5VZV1 264 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 LCLAT1Q6UWP7 414 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TMEM207Q6UWW9 146 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ADAMTSL5Q6ZMM2 481 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 C9orf139Q6ZV77 190 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 STOX1Q6ZVD7 989 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 NT5DC3Q86UY8 548 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CALHM1Q8IU99 346 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TRAPPC5Q8IUR0 188 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 KIRREL3Q8IZU9 778 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 VKORC1L1Q8N0U8 176 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MTURNQ8N3F0 131 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MREGQ8N565 214 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 PRELID2Q8N945 189 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ACBD4Q8NC06 268 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 DUSP18Q8NEJ0 188 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CCDC54Q8NEL0 328 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 KLHDC9Q8NEP7 349 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OR4D10Q8NGI6 311 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OR5B3Q8NH48 314 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OR1L3Q8NH93 324 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SYNPRQ8TBG9 265 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 DYNC2LI1Q8TCX1 351 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MCOLN3Q8TDD5 553 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 PYROXD1Q8WU10 500 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 FAM172AQ8WUF8 416 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TFB1MQ8WVM0 346 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 APOBEC4Q8WW27 367 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TCTEX1D2Q8WW35 142 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 APH1BQ8WW43 257 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 DYDC1Q8WWB3 177 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 DNAJA3Q96EY1 480 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ADGRG7Q96K78 797 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 HSFY1Q96LI6 401 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OR8B4Q96RC9 309 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SLC22A4Q9H015 551 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 LHX5Q9H2C1 402 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 MFSD1Q9H3U5 465 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 PPDPFQ9H3Y8 114 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF385DQ9H6B1 395 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 TMEM38AQ9H6F2 299 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CWH43Q9H720 699 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 ZDHHC4Q9NPG8 344 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 IFT46Q9NQC8 304 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SLC2A9Q9NRM0 540 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SPANXB1Q9NS25 103 aaPredicted RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 INTS9Q9NV88 658 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 OCIAD1Q9NX40 245 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 THUMPD1Q9NXG2 353 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SLC25A37Q9NYZ2 338 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 IL17CQ9P0M4 197 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 CIDEBQ9UHD4 219 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 RPL36Q9Y3U8 105 aaKnown RBP3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SVEP1Q4LDE5 3571 aa3.15□□□□□ -1.91
AC055720.1-201ENST00000539552 SMIM28A0A1B0GU29 152 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 A0A1W2PR80 420 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 USP27XA6NNY8 438 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 LYRM9A8MSI8 78 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF724A8MTY0 619 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 NEDD8-MDP1E9PL57 170 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 C11orf98E9PRG8 122 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 J3QLI3 93 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 ERI3O43414 337 aaKnown RBP3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 CDC40O60508 579 aaKnown RBP eCLIP3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 GLSO94925 669 aaPredicted RBP3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 RAB36O95755 333 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 CLIC3O95833 236 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 ISG15P05161 165 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 CALB1P05937 261 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 THRAP10827 490 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 PSG1P11464 419 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 HLA-DOBP13765 273 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 IDO1P14902 403 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 CD36P16671 472 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 IGFBP3P17936 291 aaPredicted RBP3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 RPL35AP18077 110 aaKnown RBP3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 SERPINA2P20848 420 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 CCNE1P24864 410 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 TSFMP43897 325 aaKnown RBP3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 SLCO1A2P46721 670 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 CYB561P49447 251 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 STC1P52823 247 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 TAS2R39P59534 338 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 SPCS3P61009 180 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 PRKCDQ05655 676 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 DLG1Q12959 904 aa3.14□□□□□ -1.91
AC055720.1-201ENST00000539552 SRSF6Q13247 344 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms