RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TMPRSS13Q9BYE2 586 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 SRXN1Q9BYN0 137 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 PRRG4Q9BZD6 226 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 OR2S2Q9NQN1 319 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 LOXL2Q9Y4K0 774 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 PRR14LQ5THK1 2151 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 BOD1L1Q8NFC6 3051 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 G3V3Q6 166 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 DHHO43323 396 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 CER1O95813 267 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 IGFBP3P17936 291 aaPredicted RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 MSR1P21757 451 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 PTGS2P35354 604 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 EIF1P41567 113 aaKnown RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 DUSP3P51452 185 aaPredicted RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 C3AR1Q16581 482 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 DCAF12Q5T6F0 453 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 SLC36A1Q7Z2H8 476 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 OR10R2Q8NGX6 335 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 TOMM40LQ969M1 308 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 THOC3Q96J01 351 aaKnown RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 HDHD3Q9BSH5 251 aaPredicted RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 MRPL13Q9BYD1 178 aaKnown RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 METTL8Q9H825 291 aaKnown RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 SEMA5BQ9P283 1151 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 COL4A2P08572 1712 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 NUP210LQ5VU65 1888 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 A0A1B0GTI1 187 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 AQP7P3A6NL99 342 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 M0R135 149 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 TSPAN4O14817 238 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 SFTPBP07988 381 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 HOXB5P09067 269 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF84P51523 738 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 MTCP1P56278 107 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 S100A10P60903 97 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 HLXQ14774 488 aaPredicted RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 TAF9Q16594 264 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 RAB11FIP2Q7L804 512 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 AAED1Q7RTV5 226 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 GPR137CQ8N3F9 429 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 NKAIN3Q8N8D7 197 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 OR9K2Q8NGE7 335 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 OR2Y1Q8NGV0 311 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 OR6X1Q8NH79 312 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF799Q96GE5 643 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 GUCD1Q96NT3 240 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 NBASA2RRP1 2371 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 WIPF3A6NGB9 483 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 OR2AT4A6NND4 320 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 HSPB6O14558 160 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 CRYZL1O95825 349 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 IGHMP01871 453 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 CSTBP04080 98 aaKnown RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 PDGFAP04085 211 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 LIFP15018 202 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 C4BPBP20851 252 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 HTR5AP47898 357 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 ATP1B3P54709 279 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 IL11RAQ14626 422 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 KISS1Q15726 138 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 SEZ6L2Q6UXD5 910 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 GSG1LQ6UXU4 331 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 C6orf201Q7Z4U5 140 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 TMEM17Q86X19 198 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 BHLHE23Q8NDY6 225 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 ABHD3Q8WU67 409 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 NAA11Q9BSU3 229 aaPredicted RBP7.67□□□□□ -1.18
UBE3B-208ENST00000538070 B3GNT2Q9NY97 397 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 EHFQ9NZC4 300 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 HDGFL3Q9Y3E1 203 aa7.67□□□□□ -1.18
UBE3B-208ENST00000538070 CCDC187A0A096LP49 1063 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 OR5H14A6NHG9 310 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 HSPB2A8KAH6 182 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 SNRPGP15A8MWD9 76 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 F5H0A9 414 aaPredicted RBP7.66□□□□□ -1.18
UBE3B-208ENST00000538070 ZIC3O60481 467 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 CSRP1P21291 193 aaKnown RBP7.66□□□□□ -1.18
UBE3B-208ENST00000538070 AKR1C2P52895 323 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 FXYD4P59646 89 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 AKR1C1Q04828 323 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 HSPB2Q16082 182 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 SNAI3Q3KNW1 292 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 SLC25A47Q6Q0C1 308 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 UBALD2Q8IYN6 164 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 GJC3Q8NFK1 279 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 OR13C8Q8NGS7 320 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 OIT3Q8WWZ8 545 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 PIGCQ92535 297 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 FOXRED1Q96CU9 486 aaPredicted RBP7.66□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF75AQ96N20 296 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 NARFLQ9H6Q4 476 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 CALHM2Q9HA72 323 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 CHMP1AQ9HD42 196 aaPredicted RBP7.66□□□□□ -1.18
UBE3B-208ENST00000538070 NBEAQ8NFP9 2946 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 CACNA1DQ01668 2161 aa7.66□□□□□ -1.18
UBE3B-208ENST00000538070 SLC33A1O00400 549 aaPredicted RBP7.66□□□□□ -1.18
UBE3B-208ENST00000538070 SRSF10O75494 262 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms