RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 ADRA2CP18825 462 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 GSK3AP49840 483 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 PSMA6P60900 246 aaKnown RBP12.38□□□□□ -0.43
USP28-204ENST00000537642 GFOD2Q3B7J2 385 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 ESCO2Q56NI9 601 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 C1QL2Q7Z5L3 287 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 KLBQ86Z14 1044 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 TCEANCQ8N8B7 351 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 SPERTQ8NA61 448 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 PLPP7Q8NBV4 271 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 C19orf18Q8NEA5 215 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 PYDC1Q8WXC3 89 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 CENPNQ96H22 339 aaPredicted RBP12.38□□□□□ -0.43
USP28-204ENST00000537642 CIB1Q99828 191 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 PRRG3Q9BZD7 231 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 C7orf69Q9H7B7 122 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 PPP1R3EQ9H7J1 279 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 FN3KRPQ9HA64 309 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 RNF7Q9UBF6 113 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 OAZ3Q9UMX2 235 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 COPS3Q9UNS2 423 aa12.38□□□□□ -0.43
USP28-204ENST00000537642 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.37□□□□□ -0.43
USP28-204ENST00000537642 PSMD9O00233 223 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 TCF21O43680 179 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 GRPP07492 148 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 RPS2P15880 293 aaKnown RBP12.37□□□□□ -0.43
USP28-204ENST00000537642 ZNF12P17014 697 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 CFL1P23528 166 aaKnown RBP12.37□□□□□ -0.43
USP28-204ENST00000537642 CPT2P23786 658 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 POLR2IP36954 125 aaKnown RBP12.37□□□□□ -0.43
USP28-204ENST00000537642 ACTR3P61158 418 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 OR8B8Q15620 311 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 AADACL4Q5VUY2 407 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 ZNF826PQ6ZT77 177 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 MEPCEQ7L2J0 689 aaKnown RBP12.37□□□□□ -0.43
USP28-204ENST00000537642 KRT77Q7Z794 578 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 WDR86Q86TI4 376 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 TEX29Q8N6K0 151 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 OR8B12Q8NGG6 310 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 TMEM163Q8TC26 289 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 SSBP3Q9BWW4 388 aaPredicted RBP12.37□□□□□ -0.43
USP28-204ENST00000537642 RGCCQ9H4X1 137 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 NIPAL2Q9H841 368 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 MIOXQ9UGB7 285 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 LRCH1Q9Y2L9 728 aa12.37□□□□□ -0.43
USP28-204ENST00000537642 SAC3D1A6NKF1 404 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 FSHBP01225 129 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 EPHA1P21709 976 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 ACKR3P25106 362 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 CD80P33681 288 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 MZT1Q08AG7 82 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 ZNF154Q13106 437 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 KPNB1Q14974 876 aaKnown RBP12.36□□□□□ -0.43
USP28-204ENST00000537642 LIPNQ5VXI9 398 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 NXNL2Q5VZ03 156 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 KCTD18Q6PI47 426 aaPredicted RBP12.36□□□□□ -0.43
USP28-204ENST00000537642 DEGS2Q6QHC5 323 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 LYPD2Q6UXB3 125 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 BOLLQ8N9W6 283 aaKnown RBP12.36□□□□□ -0.43
USP28-204ENST00000537642 CSNK2A3Q8NEV1 391 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 OR8S1Q8NH09 359 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 NEIL1Q96FI4 390 aaPredicted RBP12.36□□□□□ -0.43
USP28-204ENST00000537642 IL4I1Q96RQ9 567 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 CNN2Q99439 309 aaKnown RBP12.36□□□□□ -0.43
USP28-204ENST00000537642 PKP2Q99959 881 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 OSBPL10Q9BXB5 764 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 GABARAPL3Q9BY60 117 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 TTTY10Q9BZA0 68 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 OCEL1Q9H607 264 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 C14orf119Q9NWQ9 140 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 C1orf123Q9NWV4 160 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 ENOPH1Q9UHY7 261 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 RHBDD3Q9Y3P4 386 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 INSIG2Q9Y5U4 225 aa12.36□□□□□ -0.43
USP28-204ENST00000537642 SLC22A31A6NKX4 558 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 A6NLC8 198 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 H3BNX3 289 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 GNB2P62879 340 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 PAX2Q02962 417 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 ROM1Q03395 351 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 SFRP4Q6FHJ7 346 aaPredicted RBP12.35□□□□□ -0.43
USP28-204ENST00000537642 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 C11orf53Q8IXP5 236 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 OR8B3Q8NGG8 313 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 NANPQ8TBE9 248 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 ASB17Q8WXJ9 295 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 OR8B4Q96RC9 309 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 OR8B2Q96RD0 313 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 C19orf24Q9BVV8 132 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 PAPOLGQ9BWT3 736 aaKnown RBP12.35□□□□□ -0.43
USP28-204ENST00000537642 RIBC2Q9H4K1 309 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 ADGRL4Q9HBW9 690 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 FAM206AQ9NX38 181 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 H2AFY2Q9P0M6 372 aaPredicted RBP12.35□□□□□ -0.43
USP28-204ENST00000537642 OR5V1Q9UGF6 321 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 TMEM14AQ9Y6G1 99 aa12.35□□□□□ -0.43
USP28-204ENST00000537642 STAB1Q9NY15 2570 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms