RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR5M1Q8NGP8 315 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 MVB12AQ96EY5 273 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 CXorf58Q96LI9 332 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 CMTM3Q96MX0 182 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 NEURL2Q9BR09 285 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 MED18Q9BUE0 208 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 SRRQ9GZT4 340 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 TXNIPQ9H3M7 391 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 TMEM231Q9H6L2 316 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 DOCK1Q14185 1865 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 PIAS2O75928 621 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 OR2J3O76001 311 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 BMI1P35226 326 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 IRS1P35568 1242 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 PMP22Q01453 160 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 SMIM21Q3B7S5 101 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF628Q5EBL2 1059 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 ALKAL1Q6UXT8 129 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 UBE3DQ7Z6J8 389 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 LYG2Q86SG7 212 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 SLCO4A1Q96BD0 722 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 GABARAPL1Q9H0R8 117 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 S1PR5Q9H228 398 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 BCL2L10Q9HD36 194 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 PPT2Q9UMR5 302 aa9.64□□□□□ -0.87
CLIP1-209ENST00000537178 A0A1W2PNR3 127 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 PRSS37A4D1T9 235 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 CD3DP04234 171 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF17P17021 662 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 ZBTB25P24278 435 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 MLF1P58340 268 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 INSM1Q01101 510 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-209ENST00000537178 PAX5Q02548 391 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 SLC17A1Q14916 467 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 SLC25A26Q70HW3 274 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 CMTM4Q8IZR5 234 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 MARCH1Q8TCQ1 289 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 TEX37Q96LM6 180 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 DEFB127Q9H1M4 99 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 SLC25A19Q9HC21 320 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 RALGAPA2Q2PPJ7 1873 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 CXCL13O43927 109 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 LIMS3P0CW19 117 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 LIMS4P0CW20 117 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 PI3P19957 117 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 PIGPP57054 158 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 OR52N5Q8NH56 324 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 MOB3AQ96BX8 217 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 MRGPRX4Q96LA9 322 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 HCSTQ9UBK5 93 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 HOXC11O43248 304 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-209ENST00000537178 FZD6O60353 706 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 HRH1P35367 487 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 DUSP2Q05923 314 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 BAMBIQ13145 260 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 DTWD2Q8NBA8 298 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 IER2Q9BTL4 223 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 ZDHHC5Q9C0B5 715 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 ZBP1Q9H171 429 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 HES4Q9HCC6 221 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 OR51B4Q9Y5P0 310 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 APC2O95996 2303 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 FAM221AA4D161 298 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 H0YIG0 161 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 PHOX2AO14813 284 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 FGF17O60258 216 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 CYC1P08574 325 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 BMP5P22003 454 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 PYCR3Q53H96 274 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 SLC16A12Q6ZSM3 486 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 WFDC8Q8IUA0 241 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 COMMD1Q8N668 190 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 HGDQ93099 445 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 WBP2Q969T9 261 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 ERGIC1Q969X5 290 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 POM121L2Q96KW2 1035 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 SPACA5Q96QH8 159 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 WDR61Q9GZS3 305 aaKnown RBP9.63□□□□□ -0.87
CLIP1-209ENST00000537178 GDF2Q9UK05 429 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-209ENST00000537178 ST3GAL6Q9Y274 331 aa9.63□□□□□ -0.87
CLIP1-209ENST00000537178 SERPINE3A8MV23 424 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 DHHO43323 396 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 HPP00738 406 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 GZMKP49863 264 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CD300CQ08708 224 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CLEC9AQ6UXN8 241 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 SLC38A6Q8IZM9 456 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 RELL2Q8NC24 303 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ZNF680Q8NEM1 530 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 NOL4LQ96MY1 436 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 PBOV1Q9GZY1 135 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 MAGT1Q9H0U3 335 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 A0A0A6YYJ9 748 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CCKARP32238 428 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 GP2P55259 537 aaKnown RBP9.62□□□□□ -0.87
CLIP1-209ENST00000537178 CLDN20P56880 219 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 PNLIPRP3Q17RR3 467 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 STAC2Q6ZMT1 411 aa9.62□□□□□ -0.87
CLIP1-209ENST00000537178 BCL2L2Q92843 193 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms