RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MBOAT4Q96T53 435 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 SLC29A1Q99808 456 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 APOL4Q9BPW4 351 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 FGF23Q9GZV9 251 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 OPA3Q9H6K4 179 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 PATZ1Q9HBE1 687 aaKnown RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM165Q9HC07 324 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 H2AFY2Q9P0M6 372 aaPredicted RBP11.04□□□□□ -0.64
PRKDC-206ENST00000536429 AASSQ9UDR5 926 aa11.04□□□□□ -0.64
PRKDC-206ENST00000536429 TRAV20A0A0B4J274 112 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 ANKRD30BLA7E2S9 258 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 GMDSO60547 372 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 PNPP00491 289 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 GRPP07492 148 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 HTR1FP30939 366 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 MDH2P40926 338 aaKnown RBP11.03□□□□□ -0.64
PRKDC-206ENST00000536429 CXCR4P61073 352 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 OR8B8Q15620 311 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 ZNF181Q2M3W8 571 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 FAHD2BQ6P2I3 314 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-206ENST00000536429 ZNF322Q6U7Q0 402 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-206ENST00000536429 GID4Q8IVV7 300 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 ZNF679Q8IYX0 411 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 PQLC1Q8N2U9 271 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 SPICQ8N5J4 248 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 FAHD2AQ96GK7 314 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 RAB3IPQ96QF0 476 aaPredicted RBP11.03□□□□□ -0.64
PRKDC-206ENST00000536429 TBX5Q99593 518 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM246Q9BRR3 403 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 TMPRSS13Q9BYE2 586 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 SP140LQ9H930 580 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 MMP26Q9NRE1 261 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 HAO2Q9NYQ3 351 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 MRM2Q9UI43 246 aaKnown RBP11.03□□□□□ -0.64
PRKDC-206ENST00000536429 IKZF2Q9UKS7 526 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 ARHGAP32A7KAX9 2087 aa11.03□□□□□ -0.64
PRKDC-206ENST00000536429 ANK2Q01484 3957 aa11.02□□□□□ -0.64
PRKDC-206ENST00000536429 TMEM269A0A1B0GVZ9 245 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 IFNL4K9M1U5 179 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 PHF1O43189 567 aaPredicted RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 SRSF10O75494 262 aaKnown RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 HNF1AP20823 631 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 CD80P33681 288 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 DDOSTP39656 456 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 CSNK2BP67870 215 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 KCTD18Q6PI47 426 aaPredicted RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 DEGS2Q6QHC5 323 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 LYPD2Q6UXB3 125 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 C11orf53Q8IXP5 236 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 KLHL36Q8N4N3 616 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 BOLLQ8N9W6 283 aaKnown RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 DEFB108BQ8NET1 73 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 OR8J1Q8NGP2 316 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 ASB17Q8WXJ9 295 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 PAPOLGQ9BWT3 736 aaKnown RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 MROQ9BYG7 248 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 PBOV1Q9GZY1 135 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 RGCCQ9H4X1 137 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 NIPAL2Q9H841 368 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 FN3KRPQ9HA64 309 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 C1orf123Q9NWV4 160 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 WARS2Q9UGM6 360 aaKnown RBP11.02□□□□□ -0.65
PRKDC-206ENST00000536429 PCDHB10Q9UN67 800 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 TMEM14AQ9Y6G1 99 aa11.02□□□□□ -0.65
PRKDC-206ENST00000536429 PPIAL4EA0A075B759 164 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 LOC105371242A0A075B767 164 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 A0A1W2PQL4 384 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-206ENST00000536429 LRRC30A6NM36 301 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF850A8MQ14 1090 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 PPIAL4DF5H284 164 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 TRAPPC2LH3BP13 241 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 ENTPD6O75354 484 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 IGLV3-1P01715 115 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 WNT2P09544 360 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 PPIAL4FP0DN26 164 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 ANPEPP15144 967 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 EGR1P18146 543 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 CFL1P23528 166 aaKnown RBP11.01□□□□□ -0.65
PRKDC-206ENST00000536429 SRP14P37108 136 aaKnown RBP11.01□□□□□ -0.65
PRKDC-206ENST00000536429 RIDAP52758 137 aaKnown RBP11.01□□□□□ -0.65
PRKDC-206ENST00000536429 CDC42P60953 191 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 ZNF404Q494X3 552 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 DMRTC1Q5HYR2 192 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 SFRP4Q6FHJ7 346 aaPredicted RBP11.01□□□□□ -0.65
PRKDC-206ENST00000536429 OR11L1Q8NGX0 322 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 OR8S1Q8NH09 359 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 OR51E1Q8TCB6 317 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 ERGIC1Q969X5 290 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 ITPKCQ96DU7 683 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 HRASLS5Q96KN8 279 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 RNF7Q9UBF6 113 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 OPN4Q9UHM6 478 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 NOP16Q9Y3C1 178 aaKnown RBP11.01□□□□□ -0.65
PRKDC-206ENST00000536429 PPIAL4AQ9Y536 164 aa11.01□□□□□ -0.65
PRKDC-206ENST00000536429 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms