RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 B9D1Q9UPM9 204 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 PIGLQ9Y2B2 252 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 NSG2Q9Y328 171 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 NEUROG3Q9Y4Z2 214 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 NUBP2Q9Y5Y2 271 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 SLC22A7Q9Y694 548 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 BOD1L1Q8NFC6 3051 aa2.73□□□□□ -1.97
USP48-215ENST00000534705 PIEZO2Q9H5I5 2752 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 GTF3C1Q12789 2109 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 TRAV26-1A0A087WT03 109 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 LOC285095A0A1B0GVY8 99 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CIB4A0PJX0 185 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 C7orf66A4D0T2 115 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 TRABD2BA6NFA1 517 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 A8MUA0 341 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 NPIPA2E9PIF3 369 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 I3L521 148 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 APOC4-APOC2K7ER74 178 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 STX7O15400 261 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 AKR7A2O43488 359 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 DNAJB6O75190 326 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 LGI1O95970 557 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 DHFRP00374 187 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 JCHAINP01591 159 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 APOA1P02647 267 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 APOC2P02655 101 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 S100A8P05109 93 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 FABP1P07148 127 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ANXA4P09525 319 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 FOLR2P14207 255 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 B4GALT1P15291 398 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CBR1P16152 277 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HNF1AP20823 631 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ATP6V1B2P21281 511 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 FASP25445 335 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 S100PP25815 95 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CD1BP29016 333 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SRD5A2P31213 254 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CDKN1BP46527 198 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SPINT3P49223 89 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ARRB1P49407 418 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 SERPINB9P50453 376 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 NUDT2P50583 147 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ATP4BP51164 291 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HCFC1P51610 2035 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 LIMK2P53671 638 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RAB25P57735 213 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RAB4BP61018 213 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 PPIAP62937 165 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 DYNLT1P63172 113 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 DCDP81605 110 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 EMX1Q04741 257 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 MAB21L1Q13394 359 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 C1orf61Q13536 156 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HEPACAMQ14CZ8 416 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 EXOSC7Q15024 291 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 NCF4Q15080 339 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SPHARQ15513 63 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 GUCA2BQ16661 112 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 PCK2Q16822 640 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 DEFB133Q30KQ1 61 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 GLYR1Q49A26 553 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 COQ5Q5HYK3 327 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 NHLRC3Q5JS37 347 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CTSL3PQ5NE16 218 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SAMD4BQ5PRF9 694 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 SLC25A30Q5SVS4 291 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 DNLZQ5SXM8 178 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HENMT1Q5T8I9 393 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 HES5Q5TA89 166 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 DDI2Q5TDH0 399 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 MLIPQ5VWP3 458 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 LIPKQ5VXJ0 399 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RAET1LQ5VY80 246 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ANKRD22Q5VYY1 191 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 LRRC66Q68CR7 880 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RTL6Q6ICC9 239 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 PAGE2Q7Z2X7 111 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 COX8CQ7Z4L0 72 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HSD17B13Q7Z5P4 300 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 LUZP2Q86TE4 346 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 C17orf82Q86X59 251 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 STX12Q86Y82 276 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HIPK1Q86Z02 1210 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ZNF567Q8N184 647 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 STPG2Q8N412 459 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 GPR26Q8NDV2 337 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 OR4C5Q8NGB2 326 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 OR52B6Q8NGF0 335 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CCL4L1Q8NHW4 92 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 MCFD2Q8NI22 146 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 KCNG3Q8TAE7 436 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ACTL9Q8TC94 416 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SPPL2AQ8TCT8 520 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CANT1Q8WVQ1 401 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 TMEM37Q8WXS4 190 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ELMO1Q92556 727 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 KIAA1143Q96AT1 154 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 RCN3Q96D15 328 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 HAVCR1Q96D42 359 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms